Cluster: PUL0483
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate: pectin
- Genome ID: PUL0483
- CGC Family ID: CGCFAM_01475
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_009441 | FJOH_RS21825 | 1 | 2856 | + | GH2 |
| CAZyme | NC_009441 | FJOH_RS21830 | 3035 | 4510 | + | CE12 | CE12 |
| pfam | NC_009441 | FJOH_RS21835 | 4690 | 4866 | - | Hc1 |
| CAZyme | NC_009441 | FJOH_RS21840 | 5174 | 6502 | - | GH28 |
| pfam | NC_009441 | FJOH_RS21845 | 6584 | 7873 | - | DUF4861 |
| pfam | NC_009441 | FJOH_RS21850 | 7911 | 8234 | - | rhaM |
| CAZyme | NC_009441 | FJOH_RS21855 | 8245 | 9315 | - | GH117 |
| CAZyme | NC_009441 | FJOH_RS21860 | 9459 | 10988 | - | CE20 |
| pfam | NC_009441 | FJOH_RS21865 | 11147 | 12682 | - | SusD_RagB | SusD-like_3 |
| TC | NC_009441 | FJOH_RS21870 | 12689 | 15832 | - | 1.B.14.6.1 |
| CAZyme | NC_009441 | FJOH_RS21875 | 16276 | 19071 | + | GH106 |
| CAZyme | NC_009441 | FJOH_RS21880 | 19089 | 20213 | + | GH105 |
Gene ID: FJOH_RS21825
Type: CAZyme
Location: 1 - 2856 (+)
Type: CAZyme
Location: 1 - 2856 (+)
Gene ID: FJOH_RS21830
Type: CAZyme
Location: 3035 - 4510 (+)
Type: CAZyme
Location: 3035 - 4510 (+)
Gene ID: FJOH_RS21835
Type: pfam
Location: 4690 - 4866 (-)
Type: pfam
Location: 4690 - 4866 (-)
Gene ID: FJOH_RS21840
Type: CAZyme
Location: 5174 - 6502 (-)
Type: CAZyme
Location: 5174 - 6502 (-)
Gene ID: FJOH_RS21845
Type: pfam
Location: 6584 - 7873 (-)
Type: pfam
Location: 6584 - 7873 (-)
Gene ID: FJOH_RS21850
Type: pfam
Location: 7911 - 8234 (-)
Type: pfam
Location: 7911 - 8234 (-)
Gene ID: FJOH_RS21855
Type: CAZyme
Location: 8245 - 9315 (-)
Type: CAZyme
Location: 8245 - 9315 (-)
Gene ID: FJOH_RS21860
Type: CAZyme
Location: 9459 - 10988 (-)
Type: CAZyme
Location: 9459 - 10988 (-)
Gene ID: FJOH_RS21865
Type: pfam
Location: 11147 - 12682 (-)
Type: pfam
Location: 11147 - 12682 (-)
Gene ID: FJOH_RS21870
Type: TC
Location: 12689 - 15832 (-)
Type: TC
Location: 12689 - 15832 (-)
Gene ID: FJOH_RS21875
Type: CAZyme
Location: 16276 - 19071 (+)
Type: CAZyme
Location: 16276 - 19071 (+)
Gene ID: FJOH_RS21880
Type: CAZyme
Location: 19089 - 20213 (+)
Type: CAZyme
Location: 19089 - 20213 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium johnsoniae
Gene Composition
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