Cluster: PUL0480
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate: xylan
- Genome ID: PUL0480
- CGC Family ID: CGCFAM_06458
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_009441 | FJOH_RS19995 | 1 | 2280 | + | GH3 |
| TF | NC_009441 | FJOH_RS20000 | 2643 | 6797 | + | HTH_AraC | HTH_AraC |
| TC | NC_009441 | FJOH_RS20005 | 7238 | 10342 | + | 1.B.14.6.1 |
| pfam | NC_009441 | FJOH_RS20010 | 10401 | 11924 | + | SusD_RagB | SusD-like_3 |
| pfam | NC_009441 | FJOH_RS20015 | 11933 | 13036 | + | TIG |
| CAZyme | NC_009441 | FJOH_RS20020 | 13385 | 14776 | + | GH10 |
| CAZyme | NC_009441 | FJOH_RS20025 | 14970 | 15884 | - | GH16 |
| CAZyme | NC_009441 | FJOH_RS20030 | 16115 | 17407 | - | GH8 |
| TC | NC_009441 | FJOH_RS20035 | 18192 | 19652 | + | 2.A.2.3.6 |
Gene ID: FJOH_RS19995
Type: CAZyme
Location: 1 - 2280 (+)
Type: CAZyme
Location: 1 - 2280 (+)
Gene ID: FJOH_RS20000
Type: TF
Location: 2643 - 6797 (+)
Type: TF
Location: 2643 - 6797 (+)
Gene ID: FJOH_RS20005
Type: TC
Location: 7238 - 10342 (+)
Type: TC
Location: 7238 - 10342 (+)
Gene ID: FJOH_RS20010
Type: pfam
Location: 10401 - 11924 (+)
Type: pfam
Location: 10401 - 11924 (+)
Gene ID: FJOH_RS20015
Type: pfam
Location: 11933 - 13036 (+)
Type: pfam
Location: 11933 - 13036 (+)
Gene ID: FJOH_RS20020
Type: CAZyme
Location: 13385 - 14776 (+)
Type: CAZyme
Location: 13385 - 14776 (+)
Gene ID: FJOH_RS20025
Type: CAZyme
Location: 14970 - 15884 (-)
Type: CAZyme
Location: 14970 - 15884 (-)
Gene ID: FJOH_RS20030
Type: CAZyme
Location: 16115 - 17407 (-)
Type: CAZyme
Location: 16115 - 17407 (-)
Gene ID: FJOH_RS20035
Type: TC
Location: 18192 - 19652 (+)
Type: TC
Location: 18192 - 19652 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium johnsoniae
Gene Composition
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