Cluster: PUL0479
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 11
- Substrate: pectin
- Genome ID: PUL0479
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_009441 | FJOH_RS16145 | 1 | 1935 | - | GH43_19 | GH43_34 |
| CAZyme | NC_009441 | FJOH_RS16150 | 1935 | 3296 | - | GH27 |
| CAZyme | NC_009441 | FJOH_RS16155 | 3417 | 5837 | - | GH2 |
| CAZyme | NC_009441 | FJOH_RS16160 | 5869 | 8337 | - | GH95 |
| CAZyme | NC_009441 | FJOH_RS16165 | 8401 | 10386 | - | GH51_2 |
| CAZyme | NC_009441 | FJOH_RS16170 | 10411 | 11850 | - | GH28 |
| CAZyme | NC_009441 | FJOH_RS16175 | 12062 | 13591 | - | GH28 |
| TC | NC_009441 | FJOH_RS16180 | 13768 | 15405 | - | 2.A.21.3.2 |
| NULL(UNKNOWN) | NC_009441 | FJOH_RS16185 | 15632 | 16774 | - | NULL(UNKNOWN) |
| CAZyme | NC_009441 | FJOH_RS16190 | 16878 | 20009 | - | GH2 |
| pfam | NC_009441 | FJOH_RS16195 | 20194 | 21081 | - | MIOX |
| TF | NC_009441 | FJOH_RS16200 | 21403 | 25437 | - | HTH_AraC |
| pfam | NC_009441 | FJOH_RS16205 | 25490 | 27319 | - | Metallophos |
| pfam | NC_009441 | FJOH_RS16210 | 27544 | 28395 | - | DUF4861 |
| NULL(UNKNOWN) | NC_009441 | FJOH_RS16215 | 28679 | 29242 | - | NULL(UNKNOWN) |
| CAZyme | NC_009441 | FJOH_RS16220 | 29257 | 31530 | - | GH92 |
| CAZyme | NC_009441 | FJOH_RS16225 | 31543 | 33849 | - | GH92 |
| pfam | NC_009441 | FJOH_RS16230 | 34188 | 35801 | - | SusD_RagB | SusD-like_3 |
| TC | NC_009441 | FJOH_RS16235 | 35821 | 38832 | - | 1.B.14.6.1 |
| CAZyme | NC_009441 | FJOH_RS16240 | 39124 | 41295 | - | GH89 |
Gene ID: FJOH_RS16145
Type: CAZyme
Location: 1 - 1935 (-)
Type: CAZyme
Location: 1 - 1935 (-)
Gene ID: FJOH_RS16150
Type: CAZyme
Location: 1935 - 3296 (-)
Type: CAZyme
Location: 1935 - 3296 (-)
Gene ID: FJOH_RS16155
Type: CAZyme
Location: 3417 - 5837 (-)
Type: CAZyme
Location: 3417 - 5837 (-)
Gene ID: FJOH_RS16160
Type: CAZyme
Location: 5869 - 8337 (-)
Type: CAZyme
Location: 5869 - 8337 (-)
Gene ID: FJOH_RS16165
Type: CAZyme
Location: 8401 - 10386 (-)
Type: CAZyme
Location: 8401 - 10386 (-)
Gene ID: FJOH_RS16170
Type: CAZyme
Location: 10411 - 11850 (-)
Type: CAZyme
Location: 10411 - 11850 (-)
Gene ID: FJOH_RS16175
Type: CAZyme
Location: 12062 - 13591 (-)
Type: CAZyme
Location: 12062 - 13591 (-)
Gene ID: FJOH_RS16180
Type: TC
Location: 13768 - 15405 (-)
Type: TC
Location: 13768 - 15405 (-)
Gene ID: FJOH_RS16185
Type: null
Location: 15632 - 16774 (-)
Type: null
Location: 15632 - 16774 (-)
Gene ID: FJOH_RS16190
Type: CAZyme
Location: 16878 - 20009 (-)
Type: CAZyme
Location: 16878 - 20009 (-)
Gene ID: FJOH_RS16195
Type: pfam
Location: 20194 - 21081 (-)
Type: pfam
Location: 20194 - 21081 (-)
Gene ID: FJOH_RS16200
Type: TF
Location: 21403 - 25437 (-)
Type: TF
Location: 21403 - 25437 (-)
Gene ID: FJOH_RS16205
Type: pfam
Location: 25490 - 27319 (-)
Type: pfam
Location: 25490 - 27319 (-)
Gene ID: FJOH_RS16210
Type: pfam
Location: 27544 - 28395 (-)
Type: pfam
Location: 27544 - 28395 (-)
Gene ID: FJOH_RS16215
Type: null
Location: 28679 - 29242 (-)
Type: null
Location: 28679 - 29242 (-)
Gene ID: FJOH_RS16220
Type: CAZyme
Location: 29257 - 31530 (-)
Type: CAZyme
Location: 29257 - 31530 (-)
Gene ID: FJOH_RS16225
Type: CAZyme
Location: 31543 - 33849 (-)
Type: CAZyme
Location: 31543 - 33849 (-)
Gene ID: FJOH_RS16230
Type: pfam
Location: 34188 - 35801 (-)
Type: pfam
Location: 34188 - 35801 (-)
Gene ID: FJOH_RS16235
Type: TC
Location: 35821 - 38832 (-)
Type: TC
Location: 35821 - 38832 (-)
Gene ID: FJOH_RS16240
Type: CAZyme
Location: 39124 - 41295 (-)
Type: CAZyme
Location: 39124 - 41295 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium johnsoniae
Gene Composition
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