Cluster: PUL0478
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate: alpha-mannan
- Genome ID: PUL0478
- CGC Family ID: CGCFAM_02279
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | NC_009441 | FJOH_RS14050 | 1 | 1011 | + | LacI |
| TC | NC_009441 | FJOH_RS14055 | 1295 | 4387 | + | 1.B.14.6.2 |
| TC | NC_009441 | FJOH_RS14060 | 4400 | 5914 | + | 8.A.46.2.2 |
| CAZyme | NC_009441 | FJOH_RS14065 | 6375 | 8336 | + | GH2 |
| CAZyme | NC_009441 | FJOH_RS14070 | 8483 | 10744 | + | GH92 |
| CAZyme | NC_009441 | FJOH_RS14075 | 10897 | 13176 | + | GH92 |
| CAZyme | NC_009441 | FJOH_RS14080 | 13185 | 14648 | + | GH125 |
| pfam | NC_009441 | FJOH_RS14085 | 14670 | 15569 | + | ROK |
Gene ID: FJOH_RS14050
Type: TF
Location: 1 - 1011 (+)
Type: TF
Location: 1 - 1011 (+)
Gene ID: FJOH_RS14055
Type: TC
Location: 1295 - 4387 (+)
Type: TC
Location: 1295 - 4387 (+)
Gene ID: FJOH_RS14060
Type: TC
Location: 4400 - 5914 (+)
Type: TC
Location: 4400 - 5914 (+)
Gene ID: FJOH_RS14065
Type: CAZyme
Location: 6375 - 8336 (+)
Type: CAZyme
Location: 6375 - 8336 (+)
Gene ID: FJOH_RS14070
Type: CAZyme
Location: 8483 - 10744 (+)
Type: CAZyme
Location: 8483 - 10744 (+)
Gene ID: FJOH_RS14075
Type: CAZyme
Location: 10897 - 13176 (+)
Type: CAZyme
Location: 10897 - 13176 (+)
Gene ID: FJOH_RS14080
Type: CAZyme
Location: 13185 - 14648 (+)
Type: CAZyme
Location: 13185 - 14648 (+)
Gene ID: FJOH_RS14085
Type: pfam
Location: 14670 - 15569 (+)
Type: pfam
Location: 14670 - 15569 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium johnsoniae
Gene Composition
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