Cluster: PUL0476
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate: pectin
- Genome ID: PUL0476
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | NC_009441 | FJOH_RS10520 | 1 | 3951 | - | HTH_11 | HTH_AraC |
| TC | NC_009441 | FJOH_RS10525 | 4342 | 7359 | + | 1.B.14.6.1 |
| pfam | NC_009441 | FJOH_RS10530 | 7376 | 8899 | + | SusD_RagB | SusD-like_3 |
| CAZyme | NC_009441 | FJOH_RS10535 | 9179 | 10351 | + | GH5_13 |
| CAZyme | NC_009441 | FJOH_RS10540 | 10630 | 11658 | + | GH43_18 |
| CAZyme | NC_009441 | FJOH_RS10545 | 11857 | 13668 | + | GH2 |
| CAZyme | NC_009441 | FJOH_RS10550 | 13901 | 14923 | + | GH43_26 |
| sulfatase | NC_009441 | FJOH_RS10555 | 14948 | 16126 | + | S1_22 |
| CAZyme | NC_009441 | FJOH_RS10560 | 16323 | 17300 | + | GH43_31 |
| CAZyme | NC_009441 | FJOH_RS10565 | 17485 | 19584 | + | CBM32 | CBM32 | GH29 |
| STP | NC_009441 | FJOH_RS10570 | 19725 | 21638 | + | PIG-L |
Gene ID: FJOH_RS10520
Type: TF
Location: 1 - 3951 (-)
Type: TF
Location: 1 - 3951 (-)
Gene ID: FJOH_RS10525
Type: TC
Location: 4342 - 7359 (+)
Type: TC
Location: 4342 - 7359 (+)
Gene ID: FJOH_RS10530
Type: pfam
Location: 7376 - 8899 (+)
Type: pfam
Location: 7376 - 8899 (+)
Gene ID: FJOH_RS10535
Type: CAZyme
Location: 9179 - 10351 (+)
Type: CAZyme
Location: 9179 - 10351 (+)
Gene ID: FJOH_RS10540
Type: CAZyme
Location: 10630 - 11658 (+)
Type: CAZyme
Location: 10630 - 11658 (+)
Gene ID: FJOH_RS10545
Type: CAZyme
Location: 11857 - 13668 (+)
Type: CAZyme
Location: 11857 - 13668 (+)
Gene ID: FJOH_RS10550
Type: CAZyme
Location: 13901 - 14923 (+)
Type: CAZyme
Location: 13901 - 14923 (+)
Gene ID: FJOH_RS10555
Type: sulfatase
Location: 14948 - 16126 (+)
Type: sulfatase
Location: 14948 - 16126 (+)
Gene ID: FJOH_RS10560
Type: CAZyme
Location: 16323 - 17300 (+)
Type: CAZyme
Location: 16323 - 17300 (+)
Gene ID: FJOH_RS10565
Type: CAZyme
Location: 17485 - 19584 (+)
Type: CAZyme
Location: 17485 - 19584 (+)
Gene ID: FJOH_RS10570
Type: STP
Location: 19725 - 21638 (+)
Type: STP
Location: 19725 - 21638 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium johnsoniae
Gene Composition
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