Cluster: PUL0474
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate: xylan
- Genome ID: PUL0474
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | NC_009441 | FJOH_RS08085 | 1 | 2880 | - | GerE |
| TC | NC_009441 | FJOH_RS08090 | 3225 | 6374 | + | 1.B.14.6.1 |
| TC | NC_009441 | FJOH_RS08095 | 6393 | 7928 | + | 8.A.46.1.5 |
| CAZyme | NC_009441 | FJOH_RS08100 | 8150 | 9613 | + | GH30_1 |
| CAZyme | NC_009441 | FJOH_RS08105 | 9648 | 11111 | + | GH30_1 |
| CAZyme | NC_009441 | FJOH_RS08110 | 11145 | 13412 | + | GH3 |
| pfam | NC_009441 | FJOH_RS08115 | 13589 | 14428 | + | Exo_endo_phos |
| CAZyme | NC_009441 | FJOH_RS08120 | 14430 | 15854 | + | GH30_3 |
| CAZyme | NC_009441 | FJOH_RS08125 | 15866 | 18097 | + | GH3 |
Gene ID: FJOH_RS08085
Type: TF
Location: 1 - 2880 (-)
Type: TF
Location: 1 - 2880 (-)
Gene ID: FJOH_RS08090
Type: TC
Location: 3225 - 6374 (+)
Type: TC
Location: 3225 - 6374 (+)
Gene ID: FJOH_RS08095
Type: TC
Location: 6393 - 7928 (+)
Type: TC
Location: 6393 - 7928 (+)
Gene ID: FJOH_RS08100
Type: CAZyme
Location: 8150 - 9613 (+)
Type: CAZyme
Location: 8150 - 9613 (+)
Gene ID: FJOH_RS08105
Type: CAZyme
Location: 9648 - 11111 (+)
Type: CAZyme
Location: 9648 - 11111 (+)
Gene ID: FJOH_RS08110
Type: CAZyme
Location: 11145 - 13412 (+)
Type: CAZyme
Location: 11145 - 13412 (+)
Gene ID: FJOH_RS08115
Type: pfam
Location: 13589 - 14428 (+)
Type: pfam
Location: 13589 - 14428 (+)
Gene ID: FJOH_RS08120
Type: CAZyme
Location: 14430 - 15854 (+)
Type: CAZyme
Location: 14430 - 15854 (+)
Gene ID: FJOH_RS08125
Type: CAZyme
Location: 15866 - 18097 (+)
Type: CAZyme
Location: 15866 - 18097 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium johnsoniae
Gene Composition
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