Cluster: PUL0471_Rep_490_C2
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0471_Rep_490_C2 | Rep_490_c_2_2644 | 3471790 | 3475737 | + | HTH_AraC | HTH_AraC |
| TC | PUL0471_Rep_490_C2 | Rep_490_c_2_2645 | 3476369 | 3479521 | + | 1.B.14.6.1 |
| pfam | PUL0471_Rep_490_C2 | Rep_490_c_2_2646 | 3479546 | 3481510 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0471_Rep_490_C2 | Rep_490_c_2_2647 | 3481598 | 3483094 | + | CBM32 |
| pfam | PUL0471_Rep_490_C2 | Rep_490_c_2_2648 | 3483120 | 3484355 | + | DUF4302 |
| CAZyme | PUL0471_Rep_490_C2 | Rep_490_c_2_2649 | 3484637 | 3486922 | + | GH92 |
| CAZyme | PUL0471_Rep_490_C2 | Rep_490_c_2_2650 | 3486929 | 3489268 | + | GH92 |
| pfam | PUL0471_Rep_490_C2 | Rep_490_c_2_2651 | 3489298 | 3490092 | + | BSP |
| CAZyme | PUL0471_Rep_490_C2 | Rep_490_c_2_2652 | 3490139 | 3492445 | + | GH92 |
Gene ID: Rep_490_c_2_2644
Type: TF
Location: 3471790 - 3475737 (+)
Type: TF
Location: 3471790 - 3475737 (+)
Gene ID: Rep_490_c_2_2645
Type: TC
Location: 3476369 - 3479521 (+)
Type: TC
Location: 3476369 - 3479521 (+)
Gene ID: Rep_490_c_2_2646
Type: pfam
Location: 3479546 - 3481510 (+)
Type: pfam
Location: 3479546 - 3481510 (+)
Gene ID: Rep_490_c_2_2647
Type: CAZyme
Location: 3481598 - 3483094 (+)
Type: CAZyme
Location: 3481598 - 3483094 (+)
Gene ID: Rep_490_c_2_2648
Type: pfam
Location: 3483120 - 3484355 (+)
Type: pfam
Location: 3483120 - 3484355 (+)
Gene ID: Rep_490_c_2_2649
Type: CAZyme
Location: 3484637 - 3486922 (+)
Type: CAZyme
Location: 3484637 - 3486922 (+)
Gene ID: Rep_490_c_2_2650
Type: CAZyme
Location: 3486929 - 3489268 (+)
Type: CAZyme
Location: 3486929 - 3489268 (+)
Gene ID: Rep_490_c_2_2651
Type: pfam
Location: 3489298 - 3490092 (+)
Type: pfam
Location: 3489298 - 3490092 (+)
Gene ID: Rep_490_c_2_2652
Type: CAZyme
Location: 3490139 - 3492445 (+)
Type: CAZyme
Location: 3490139 - 3492445 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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