Cluster: PUL0463_Rep_490_C0
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0463_Rep_490_C0 | Rep_490_c_2_3749 | 4948430 | 4949638 | - | Fe_dep_repress |
| pfam | PUL0463_Rep_490_C0 | Rep_490_c_2_3750 | 4949978 | 4951861 | + | FAD_oxidored |
| pfam | PUL0463_Rep_490_C0 | Rep_490_c_2_3751 | 4951900 | 4953000 | + | DUF4434 |
| TC | PUL0463_Rep_490_C0 | Rep_490_c_2_3752 | 4952997 | 4954412 | + | 2.A.1.1.55 |
| pfam | PUL0463_Rep_490_C0 | Rep_490_c_2_3753 | 4954450 | 4955640 | + | GlcNAc_2-epim |
| CAZyme | PUL0463_Rep_490_C0 | Rep_490_c_2_3754 | 4955637 | 4957883 | + | GH89 |
| TC | PUL0463_Rep_490_C0 | Rep_490_c_2_3755 | 4958018 | 4961140 | + | 1.B.14.6.1 |
| pfam | PUL0463_Rep_490_C0 | Rep_490_c_2_3756 | 4961155 | 4963038 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0463_Rep_490_C0 | Rep_490_c_2_3757 | 4963060 | 4964436 | + | F5_F8_type_C | BT_3987-like_N | BT_3987-like_N |
| pfam | PUL0463_Rep_490_C0 | Rep_490_c_2_3758 | 4964454 | 4966229 | + | GDPD | DUF4855 |
| pfam | PUL0463_Rep_490_C0 | Rep_490_c_2_3760 | 4966455 | 4966772 | + | Fn3-like |
| NULL(UNKNOWN) | PUL0463_Rep_490_C0 | Rep_490_c_2_3761 | 4966784 | 4968040 | + | NULL(UNKNOWN) |
| CAZyme | PUL0463_Rep_490_C0 | Rep_490_c_2_3762 | 4968054 | 4969154 | + | CE2 |
Gene ID: Rep_490_c_2_3749
Type: TF
Location: 4948430 - 4949638 (-)
Type: TF
Location: 4948430 - 4949638 (-)
Gene ID: Rep_490_c_2_3750
Type: pfam
Location: 4949978 - 4951861 (+)
Type: pfam
Location: 4949978 - 4951861 (+)
Gene ID: Rep_490_c_2_3751
Type: pfam
Location: 4951900 - 4953000 (+)
Type: pfam
Location: 4951900 - 4953000 (+)
Gene ID: Rep_490_c_2_3752
Type: TC
Location: 4952997 - 4954412 (+)
Type: TC
Location: 4952997 - 4954412 (+)
Gene ID: Rep_490_c_2_3753
Type: pfam
Location: 4954450 - 4955640 (+)
Type: pfam
Location: 4954450 - 4955640 (+)
Gene ID: Rep_490_c_2_3754
Type: CAZyme
Location: 4955637 - 4957883 (+)
Type: CAZyme
Location: 4955637 - 4957883 (+)
Gene ID: Rep_490_c_2_3755
Type: TC
Location: 4958018 - 4961140 (+)
Type: TC
Location: 4958018 - 4961140 (+)
Gene ID: Rep_490_c_2_3756
Type: pfam
Location: 4961155 - 4963038 (+)
Type: pfam
Location: 4961155 - 4963038 (+)
Gene ID: Rep_490_c_2_3757
Type: pfam
Location: 4963060 - 4964436 (+)
Type: pfam
Location: 4963060 - 4964436 (+)
Gene ID: Rep_490_c_2_3758
Type: pfam
Location: 4964454 - 4966229 (+)
Type: pfam
Location: 4964454 - 4966229 (+)
Gene ID: Rep_490_c_2_3760
Type: pfam
Location: 4966455 - 4966772 (+)
Type: pfam
Location: 4966455 - 4966772 (+)
Gene ID: Rep_490_c_2_3761
Type: null
Location: 4966784 - 4968040 (+)
Type: null
Location: 4966784 - 4968040 (+)
Gene ID: Rep_490_c_2_3762
Type: CAZyme
Location: 4968054 - 4969154 (+)
Type: CAZyme
Location: 4968054 - 4969154 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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