Cluster: PUL0445
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: alginate
- Genome ID: PUL0445
- CGC Family ID: CGCFAM_06409
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | AB011415 | aly | 1 | 1926 | - | PL5 | PL7 |
| TF | AB011415 | ccpA | 1968 | 3029 | - | LacI |
| TC | AB011415 | algS | 3232 | 4323 | + | 3.A.1.1.10 |
| TC | AB011415 | algM1 | 4418 | 5392 | + | 3.A.1.1.10 |
| TC | AB011415 | algM2 | 5449 | 6330 | + | 3.A.1.1.10 |
| TC | AB011415 | algQ1 | 6409 | 7989 | + | 3.A.1.1.10 |
| TC | AB011415 | algQ2 | 8136 | 9686 | + | 3.A.1.1.10 |
| CAZyme | AB011415 | oal | 9921 | 12206 | + | PL15_1 |
Gene ID: aly
Type: CAZyme
Location: 1 - 1926 (-)
Type: CAZyme
Location: 1 - 1926 (-)
Gene ID: ccpA
Type: TF
Location: 1968 - 3029 (-)
Type: TF
Location: 1968 - 3029 (-)
Gene ID: algS
Type: TC
Location: 3232 - 4323 (+)
Type: TC
Location: 3232 - 4323 (+)
Gene ID: algM1
Type: TC
Location: 4418 - 5392 (+)
Type: TC
Location: 4418 - 5392 (+)
Gene ID: algM2
Type: TC
Location: 5449 - 6330 (+)
Type: TC
Location: 5449 - 6330 (+)
Gene ID: algQ1
Type: TC
Location: 6409 - 7989 (+)
Type: TC
Location: 6409 - 7989 (+)
Gene ID: algQ2
Type: TC
Location: 8136 - 9686 (+)
Type: TC
Location: 8136 - 9686 (+)
Gene ID: oal
Type: CAZyme
Location: 9921 - 12206 (+)
Type: CAZyme
Location: 9921 - 12206 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Species
Sphingomonas sp.
Gene Composition
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