Cluster: PUL0443
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate: beta-mannan
- Genome ID: PUL0443
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_013132 | CPIN_RS25335 | 1 | 1230 | - | CBM92 | GH16_3 |
| TF | NC_013132 | CPIN_RS25340 | 1512 | 4412 | + | GerE |
| STP | NC_013132 | CPIN_RS25345 | 4428 | 5072 | + | Sigma70_r2 | Sigma70_r4_2 |
| STP | NC_013132 | CPIN_RS25350 | 5139 | 6365 | + | FecR |
| TC | NC_013132 | CPIN_RS25355 | 6600 | 9908 | + | 1.B.14.6.1 |
| TC | NC_013132 | CPIN_RS25360 | 9920 | 11362 | + | 8.A.46.1.5 |
| pfam | NC_013132 | CPIN_RS25365 | 11437 | 13977 | + | DUF4953 | DUF5117 | DUF5118 |
| CAZyme | NC_013132 | CPIN_RS37445 | 14311 | 17490 | + | CBM32 | GH16_3 |
| CAZyme | NC_013132 | CPIN_RS37015 | 17790 | 21188 | + | CBM6 | CBM6 |
Gene ID: CPIN_RS25335
Type: CAZyme
Location: 1 - 1230 (-)
Type: CAZyme
Location: 1 - 1230 (-)
Gene ID: CPIN_RS25340
Type: TF
Location: 1512 - 4412 (+)
Type: TF
Location: 1512 - 4412 (+)
Gene ID: CPIN_RS25345
Type: STP
Location: 4428 - 5072 (+)
Type: STP
Location: 4428 - 5072 (+)
Gene ID: CPIN_RS25350
Type: STP
Location: 5139 - 6365 (+)
Type: STP
Location: 5139 - 6365 (+)
Gene ID: CPIN_RS25355
Type: TC
Location: 6600 - 9908 (+)
Type: TC
Location: 6600 - 9908 (+)
Gene ID: CPIN_RS25360
Type: TC
Location: 9920 - 11362 (+)
Type: TC
Location: 9920 - 11362 (+)
Gene ID: CPIN_RS25365
Type: pfam
Location: 11437 - 13977 (+)
Type: pfam
Location: 11437 - 13977 (+)
Gene ID: CPIN_RS37445
Type: CAZyme
Location: 14311 - 17490 (+)
Type: CAZyme
Location: 14311 - 17490 (+)
Gene ID: CPIN_RS37015
Type: CAZyme
Location: 17790 - 21188 (+)
Type: CAZyme
Location: 17790 - 21188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Species
Chitinophaga pinensis
Gene Composition
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