Cluster: PUL0420_HRGMv2_3983_C3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: HRGMv2_3983
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0420_HRGMv2_3983_C3 | HRGMv2_3983_7_68 | 119523 | 122588 | + | 1.B.14.6.1 |
| pfam | PUL0420_HRGMv2_3983_C3 | HRGMv2_3983_7_69 | 122753 | 124285 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0420_HRGMv2_3983_C3 | HRGMv2_3983_7_70 | 124427 | 126742 | + | GH3 |
| CAZyme | PUL0420_HRGMv2_3983_C3 | HRGMv2_3983_7_71 | 126884 | 128254 | + | GH144 |
Gene ID: HRGMv2_3983_7_68
Type: TC
Location: 119523 - 122588 (+)
Type: TC
Location: 119523 - 122588 (+)
Gene ID: HRGMv2_3983_7_69
Type: pfam
Location: 122753 - 124285 (+)
Type: pfam
Location: 122753 - 124285 (+)
Gene ID: HRGMv2_3983_7_70
Type: CAZyme
Location: 124427 - 126742 (+)
Type: CAZyme
Location: 124427 - 126742 (+)
Gene ID: HRGMv2_3983_7_71
Type: CAZyme
Location: 126884 - 128254 (+)
Type: CAZyme
Location: 126884 - 128254 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Composition
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