Cluster: PUL0420_HRGMv2_0156_C16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: HRGMv2_0156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0420_HRGMv2_0156_C16 | HRGMv2_0156_1_2798 | 3547183 | 3550248 | + | 1.B.14.6.1 |
| pfam | PUL0420_HRGMv2_0156_C16 | HRGMv2_0156_1_2799 | 3550313 | 3551845 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0420_HRGMv2_0156_C16 | HRGMv2_0156_1_2800 | 3551988 | 3554297 | + | GH3 |
| CAZyme | PUL0420_HRGMv2_0156_C16 | HRGMv2_0156_1_2801 | 3554346 | 3555719 | + | GH144 |
Gene ID: HRGMv2_0156_1_2798
Type: TC
Location: 3547183 - 3550248 (+)
Type: TC
Location: 3547183 - 3550248 (+)
Gene ID: HRGMv2_0156_1_2799
Type: pfam
Location: 3550313 - 3551845 (+)
Type: pfam
Location: 3550313 - 3551845 (+)
Gene ID: HRGMv2_0156_1_2800
Type: CAZyme
Location: 3551988 - 3554297 (+)
Type: CAZyme
Location: 3551988 - 3554297 (+)
Gene ID: HRGMv2_0156_1_2801
Type: CAZyme
Location: 3554346 - 3555719 (+)
Type: CAZyme
Location: 3554346 - 3555719 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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