Cluster: PUL0419_HRGMv2_0156_C1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate: pectin
- Genome ID: HRGMv2_0156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3458 | 4543328 | 4546060 | - | CBM67 | GH78 |
| TC | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3459 | 4546020 | 4547414 | - | 2.A.2.3.6 |
| CAZyme | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3460 | 4547425 | 4548594 | - | GH130_1 |
| CAZyme | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3461 | 4548621 | 4549982 | - | GH140 |
| CAZyme | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3462 | 4549987 | 4551027 | - | GH5_5 |
| CAZyme | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3463 | 4551038 | 4553608 | - | GH2 |
| CAZyme | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3464 | 4553627 | 4554712 | - | GH5_5 |
| pfam | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3465 | 4554772 | 4555944 | - | TIG | SGBP_B_XBD |
| pfam | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3466 | 4555973 | 4557736 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3467 | 4557749 | 4561000 | - | 1.B.14.6.1 |
| CAZyme | PUL0419_HRGMv2_0156_C1 | HRGMv2_0156_1_3468 | 4561120 | 4562097 | - | GH5_2 |
Gene ID: HRGMv2_0156_1_3458
Type: CAZyme
Location: 4543328 - 4546060 (-)
Type: CAZyme
Location: 4543328 - 4546060 (-)
Gene ID: HRGMv2_0156_1_3459
Type: TC
Location: 4546020 - 4547414 (-)
Type: TC
Location: 4546020 - 4547414 (-)
Gene ID: HRGMv2_0156_1_3460
Type: CAZyme
Location: 4547425 - 4548594 (-)
Type: CAZyme
Location: 4547425 - 4548594 (-)
Gene ID: HRGMv2_0156_1_3461
Type: CAZyme
Location: 4548621 - 4549982 (-)
Type: CAZyme
Location: 4548621 - 4549982 (-)
Gene ID: HRGMv2_0156_1_3462
Type: CAZyme
Location: 4549987 - 4551027 (-)
Type: CAZyme
Location: 4549987 - 4551027 (-)
Gene ID: HRGMv2_0156_1_3463
Type: CAZyme
Location: 4551038 - 4553608 (-)
Type: CAZyme
Location: 4551038 - 4553608 (-)
Gene ID: HRGMv2_0156_1_3464
Type: CAZyme
Location: 4553627 - 4554712 (-)
Type: CAZyme
Location: 4553627 - 4554712 (-)
Gene ID: HRGMv2_0156_1_3465
Type: pfam
Location: 4554772 - 4555944 (-)
Type: pfam
Location: 4554772 - 4555944 (-)
Gene ID: HRGMv2_0156_1_3466
Type: pfam
Location: 4555973 - 4557736 (-)
Type: pfam
Location: 4555973 - 4557736 (-)
Gene ID: HRGMv2_0156_1_3467
Type: TC
Location: 4557749 - 4561000 (-)
Type: TC
Location: 4557749 - 4561000 (-)
Gene ID: HRGMv2_0156_1_3468
Type: CAZyme
Location: 4561120 - 4562097 (-)
Type: CAZyme
Location: 4561120 - 4562097 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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