Cluster: PUL0419_A43.bin_3_C0
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate: pectin
- Genome ID: A43.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0419_A43.bin_3_C0 | A43_contig_103_1784 | 2371815 | 2374547 | - | CBM67 | GH78 |
| TC | PUL0419_A43.bin_3_C0 | A43_contig_103_1785 | 2374507 | 2375901 | - | 2.A.2.3.6 |
| CAZyme | PUL0419_A43.bin_3_C0 | A43_contig_103_1786 | 2375912 | 2377081 | - | GH130_1 |
| CAZyme | PUL0419_A43.bin_3_C0 | A43_contig_103_1787 | 2377108 | 2378469 | - | GH140 |
| CAZyme | PUL0419_A43.bin_3_C0 | A43_contig_103_1788 | 2378474 | 2379514 | - | GH5_5 |
| CAZyme | PUL0419_A43.bin_3_C0 | A43_contig_103_1789 | 2379525 | 2382095 | - | GH2 |
| CAZyme | PUL0419_A43.bin_3_C0 | A43_contig_103_1790 | 2382114 | 2383199 | - | GH5_5 |
| pfam | PUL0419_A43.bin_3_C0 | A43_contig_103_1791 | 2383259 | 2384431 | - | TIG | SGBP_B_XBD |
| pfam | PUL0419_A43.bin_3_C0 | A43_contig_103_1792 | 2384461 | 2386224 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0419_A43.bin_3_C0 | A43_contig_103_1793 | 2386237 | 2389488 | - | 1.B.14.6.1 |
| CAZyme | PUL0419_A43.bin_3_C0 | A43_contig_103_1794 | 2389608 | 2390585 | - | GH5_2 |
Gene ID: A43_contig_103_1784
Type: CAZyme
Location: 2371815 - 2374547 (-)
Type: CAZyme
Location: 2371815 - 2374547 (-)
Gene ID: A43_contig_103_1785
Type: TC
Location: 2374507 - 2375901 (-)
Type: TC
Location: 2374507 - 2375901 (-)
Gene ID: A43_contig_103_1786
Type: CAZyme
Location: 2375912 - 2377081 (-)
Type: CAZyme
Location: 2375912 - 2377081 (-)
Gene ID: A43_contig_103_1787
Type: CAZyme
Location: 2377108 - 2378469 (-)
Type: CAZyme
Location: 2377108 - 2378469 (-)
Gene ID: A43_contig_103_1788
Type: CAZyme
Location: 2378474 - 2379514 (-)
Type: CAZyme
Location: 2378474 - 2379514 (-)
Gene ID: A43_contig_103_1789
Type: CAZyme
Location: 2379525 - 2382095 (-)
Type: CAZyme
Location: 2379525 - 2382095 (-)
Gene ID: A43_contig_103_1790
Type: CAZyme
Location: 2382114 - 2383199 (-)
Type: CAZyme
Location: 2382114 - 2383199 (-)
Gene ID: A43_contig_103_1791
Type: pfam
Location: 2383259 - 2384431 (-)
Type: pfam
Location: 2383259 - 2384431 (-)
Gene ID: A43_contig_103_1792
Type: pfam
Location: 2384461 - 2386224 (-)
Type: pfam
Location: 2384461 - 2386224 (-)
Gene ID: A43_contig_103_1793
Type: TC
Location: 2386237 - 2389488 (-)
Type: TC
Location: 2386237 - 2389488 (-)
Gene ID: A43_contig_103_1794
Type: CAZyme
Location: 2389608 - 2390585 (-)
Type: CAZyme
Location: 2389608 - 2390585 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Composition
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