Cluster: PUL0418_HRGMv2_0156_C0
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: HRGMv2_0156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0418_HRGMv2_0156_C0 | HRGMv2_0156_1_3622 | 4766287 | 4767264 | - | fn3 |
| pfam | PUL0418_HRGMv2_0156_C0 | HRGMv2_0156_1_3623 | 4767288 | 4768295 | - | Sugar_transport | Ureide_permease | Ureide_permease |
| CAZyme | PUL0418_HRGMv2_0156_C0 | HRGMv2_0156_1_3624 | 4768314 | 4769834 | - | CE1 |
| CAZyme | PUL0418_HRGMv2_0156_C0 | HRGMv2_0156_1_3625 | 4769836 | 4771434 | - | CE1 |
| pfam | PUL0418_HRGMv2_0156_C0 | HRGMv2_0156_1_3626 | 4771447 | 4772994 | - | ADP_ribosyl_GH |
| pfam | PUL0418_HRGMv2_0156_C0 | HRGMv2_0156_1_3627 | 4773001 | 4774608 | - | ADP_ribosyl_GH |
| pfam | PUL0418_HRGMv2_0156_C0 | HRGMv2_0156_1_3628 | 4774621 | 4776585 | - | ADP_ribosyl_GH | He_PIG |
| pfam | PUL0418_HRGMv2_0156_C0 | HRGMv2_0156_1_3629 | 4776645 | 4778174 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0418_HRGMv2_0156_C0 | HRGMv2_0156_1_3630 | 4778189 | 4781122 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0156_1_3622
Type: pfam
Location: 4766287 - 4767264 (-)
Type: pfam
Location: 4766287 - 4767264 (-)
Gene ID: HRGMv2_0156_1_3623
Type: pfam
Location: 4767288 - 4768295 (-)
Type: pfam
Location: 4767288 - 4768295 (-)
Gene ID: HRGMv2_0156_1_3624
Type: CAZyme
Location: 4768314 - 4769834 (-)
Type: CAZyme
Location: 4768314 - 4769834 (-)
Gene ID: HRGMv2_0156_1_3625
Type: CAZyme
Location: 4769836 - 4771434 (-)
Type: CAZyme
Location: 4769836 - 4771434 (-)
Gene ID: HRGMv2_0156_1_3626
Type: pfam
Location: 4771447 - 4772994 (-)
Type: pfam
Location: 4771447 - 4772994 (-)
Gene ID: HRGMv2_0156_1_3627
Type: pfam
Location: 4773001 - 4774608 (-)
Type: pfam
Location: 4773001 - 4774608 (-)
Gene ID: HRGMv2_0156_1_3628
Type: pfam
Location: 4774621 - 4776585 (-)
Type: pfam
Location: 4774621 - 4776585 (-)
Gene ID: HRGMv2_0156_1_3629
Type: pfam
Location: 4776645 - 4778174 (-)
Type: pfam
Location: 4776645 - 4778174 (-)
Gene ID: HRGMv2_0156_1_3630
Type: TC
Location: 4778189 - 4781122 (-)
Type: TC
Location: 4778189 - 4781122 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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