Cluster: PUL0406
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 3
- Substrate: beta-glucan
- Genome ID: PUL0406
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NZ_PXJC01000002 | DCP27_RS03160 | 1 | 738 | + | 3.A.1.147.9 |
| pfam | NZ_PXJC01000002 | DCP27_RS07345 | 1 | 4 | + | N6_Mtase | HsdM_N |
| pfam | NZ_PXJC01000002 | DCP27_RS03165 | 750 | 1523 | + | ABC2_membrane | ABC2_membrane_3 |
| pfam | NZ_PXJC01000002 | DCP27_RS03170 | 1517 | 2323 | + | ABC2_membrane |
| TF | NZ_PXJC01000002 | DCP27_RS03175 | 2397 | 3410 | - | LacI |
| CAZyme | NZ_PXJC01000002 | DCP27_RS03180 | 3460 | 4326 | - | GH16_3 |
| CAZyme | NZ_PXJC01000002 | DCP27_RS03185 | 4347 | 6491 | - | GH3 |
| CAZyme | NZ_PXJC01000002 | DCP27_RS03200 | 7208 | 9679 | + | GH18 |
| TC | NZ_PXJC01000002 | DCP27_RS03205 | 9761 | 10171 | + | 1.E.19.1.7 |
| pfam | NZ_PXJC01000002 | DCP27_RS03210 | 10168 | 10869 | + | Amidase_2 | SPOR |
| pfam | NZ_PXJC01000002 | DCP27_RS03215 | 11001 | 11231 | + | SHOCT_2 |
| pfam | NZ_PXJC01000002 | DCP27_RS03220 | 11284 | 12843 | + | Resolvase | Recombinase | Zn_ribbon_recom |
| pfam | NZ_PXJC01000002 | DCP27_RS03225 | 12813 | 13265 | + | Recombinase |
| pfam | NZ_PXJC01000002 | DCP27_RS03230 | 13267 | 14838 | + | Resolvase | Recombinase | Zn_ribbon_recom |
| TF | NZ_PXJC01000002 | DCP27_RS03235 | 15155 | 15529 | + | HTH_5 |
| TC | NZ_PXJC01000002 | DCP27_RS03240 | 15543 | 17915 | + | 3.A.3.6.10 |
| TC | NZ_PXJC01000002 | DCP27_RS03245 | 18002 | 18466 | + | 9.B.105.1.5 |
| pfam | NZ_PXJC01000002 | DCP27_RS03250 | 18624 | 19109 | + | Fer2_BFD | zf_CopZ |
| NULL(UNKNOWN) | NZ_PXJC01000002 | DCP27_RS03255 | 19777 | 20355 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | NZ_PXJC01000002 | DCP27_RS03260 | 20394 | 20849 | + | NULL(UNKNOWN) |
| pfam | NZ_PXJC01000002 | DCP27_RS03265 | 21163 | 22401 | - | OrfB_IS605 | Cas12f1-like_TNB |
Gene ID: DCP27_RS03160
Type: TC
Location: 1 - 738 (+)
Type: TC
Location: 1 - 738 (+)
Gene ID: DCP27_RS07345
Type: pfam
Location: 1 - 4 (+)
Type: pfam
Location: 1 - 4 (+)
Gene ID: DCP27_RS03165
Type: pfam
Location: 750 - 1523 (+)
Type: pfam
Location: 750 - 1523 (+)
Gene ID: DCP27_RS03170
Type: pfam
Location: 1517 - 2323 (+)
Type: pfam
Location: 1517 - 2323 (+)
Gene ID: DCP27_RS03175
Type: TF
Location: 2397 - 3410 (-)
Type: TF
Location: 2397 - 3410 (-)
Gene ID: DCP27_RS03180
Type: CAZyme
Location: 3460 - 4326 (-)
Type: CAZyme
Location: 3460 - 4326 (-)
Gene ID: DCP27_RS03185
Type: CAZyme
Location: 4347 - 6491 (-)
Type: CAZyme
Location: 4347 - 6491 (-)
Gene ID: DCP27_RS03200
Type: CAZyme
Location: 7208 - 9679 (+)
Type: CAZyme
Location: 7208 - 9679 (+)
Gene ID: DCP27_RS03205
Type: TC
Location: 9761 - 10171 (+)
Type: TC
Location: 9761 - 10171 (+)
Gene ID: DCP27_RS03210
Type: pfam
Location: 10168 - 10869 (+)
Type: pfam
Location: 10168 - 10869 (+)
Gene ID: DCP27_RS03215
Type: pfam
Location: 11001 - 11231 (+)
Type: pfam
Location: 11001 - 11231 (+)
Gene ID: DCP27_RS03220
Type: pfam
Location: 11284 - 12843 (+)
Type: pfam
Location: 11284 - 12843 (+)
Gene ID: DCP27_RS03225
Type: pfam
Location: 12813 - 13265 (+)
Type: pfam
Location: 12813 - 13265 (+)
Gene ID: DCP27_RS03230
Type: pfam
Location: 13267 - 14838 (+)
Type: pfam
Location: 13267 - 14838 (+)
Gene ID: DCP27_RS03235
Type: TF
Location: 15155 - 15529 (+)
Type: TF
Location: 15155 - 15529 (+)
Gene ID: DCP27_RS03240
Type: TC
Location: 15543 - 17915 (+)
Type: TC
Location: 15543 - 17915 (+)
Gene ID: DCP27_RS03245
Type: TC
Location: 18002 - 18466 (+)
Type: TC
Location: 18002 - 18466 (+)
Gene ID: DCP27_RS03250
Type: pfam
Location: 18624 - 19109 (+)
Type: pfam
Location: 18624 - 19109 (+)
Gene ID: DCP27_RS03255
Type: null
Location: 19777 - 20355 (+)
Type: null
Location: 19777 - 20355 (+)
Gene ID: DCP27_RS03260
Type: null
Location: 20394 - 20849 (+)
Type: null
Location: 20394 - 20849 (+)
Gene ID: DCP27_RS03265
Type: pfam
Location: 21163 - 22401 (-)
Type: pfam
Location: 21163 - 22401 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Coprothermobacterota
Class
Coprothermobacteria
Order
Coprothermobacterales
Family
Coprothermobacteraceae
Genus
Coprothermobacter
Species
Coprothermobacter proteolyticus
Gene Composition
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