Cluster: PUL0404
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 4
- Substrate: pectin
- Genome ID: PUL0404
- CGC Family ID: CGCFAM_04135
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | CABDWQ010000001 | ALT831_02415 | 1 | 1230 | - | DUF4861 |
| pfam | CABDWQ010000001 | ALT831_02416 | 1409 | 2167 | + | adh_short | KR | adh_short_C2 |
| pfam | CABDWQ010000001 | ALT831_02417 | 2190 | 3053 | + | KduI |
| TC | CABDWQ010000001 | ALT831_02418 | 3084 | 4067 | + | 2.A.56.1.5 |
| TC | CABDWQ010000001 | ALT831_02419 | 4070 | 4555 | + | 2.A.56.1.5 |
| TC | CABDWQ010000001 | ALT831_02420 | 4555 | 5850 | + | 2.A.56.1.5 |
| TF | CABDWQ010000001 | ALT831_02421 | 5997 | 7013 | + | LacI |
| pfam | CABDWQ010000001 | ALT831_02422 | 7223 | 8713 | + | GD_AH_second | SAF | GD_AH_C |
| pfam | CABDWQ010000001 | ALT831_02423 | 8725 | 10140 | + | UxaC |
| pfam | CABDWQ010000001 | ALT831_02424 | 10143 | 11684 | + | Mannitol_dh | Mannitol_dh_C |
| pfam | CABDWQ010000001 | ALT831_02425 | 11684 | 12322 | + | Aldolase |
| STP | CABDWQ010000001 | ALT831_02426 | 12319 | 13290 | + | PfkB |
| CAZyme | CABDWQ010000001 | ALT831_02427 | 13436 | 14371 | - | CE12 |
| NULL(UNKNOWN) | CABDWQ010000001 | ALT831_02428 | 14437 | 14715 | + | NULL(UNKNOWN) |
| TC | CABDWQ010000001 | ALT831_02429 | 14575 | 17274 | - | 1.B.14.12.2 |
| CAZyme | CABDWQ010000001 | ALT831_02430 | 17956 | 19161 | + | GH105 |
| CAZyme | CABDWQ010000001 | ALT831_02431 | 19192 | 20661 | + | GH28 |
| CAZyme | CABDWQ010000001 | ALT831_02432 | 20675 | 21877 | + | CE8 |
Gene ID: ALT831_02415
Type: pfam
Location: 1 - 1230 (-)
Type: pfam
Location: 1 - 1230 (-)
Gene ID: ALT831_02416
Type: pfam
Location: 1409 - 2167 (+)
Type: pfam
Location: 1409 - 2167 (+)
Gene ID: ALT831_02417
Type: pfam
Location: 2190 - 3053 (+)
Type: pfam
Location: 2190 - 3053 (+)
Gene ID: ALT831_02418
Type: TC
Location: 3084 - 4067 (+)
Type: TC
Location: 3084 - 4067 (+)
Gene ID: ALT831_02419
Type: TC
Location: 4070 - 4555 (+)
Type: TC
Location: 4070 - 4555 (+)
Gene ID: ALT831_02420
Type: TC
Location: 4555 - 5850 (+)
Type: TC
Location: 4555 - 5850 (+)
Gene ID: ALT831_02421
Type: TF
Location: 5997 - 7013 (+)
Type: TF
Location: 5997 - 7013 (+)
Gene ID: ALT831_02422
Type: pfam
Location: 7223 - 8713 (+)
Type: pfam
Location: 7223 - 8713 (+)
Gene ID: ALT831_02423
Type: pfam
Location: 8725 - 10140 (+)
Type: pfam
Location: 8725 - 10140 (+)
Gene ID: ALT831_02424
Type: pfam
Location: 10143 - 11684 (+)
Type: pfam
Location: 10143 - 11684 (+)
Gene ID: ALT831_02425
Type: pfam
Location: 11684 - 12322 (+)
Type: pfam
Location: 11684 - 12322 (+)
Gene ID: ALT831_02426
Type: STP
Location: 12319 - 13290 (+)
Type: STP
Location: 12319 - 13290 (+)
Gene ID: ALT831_02427
Type: CAZyme
Location: 13436 - 14371 (-)
Type: CAZyme
Location: 13436 - 14371 (-)
Gene ID: ALT831_02428
Type: null
Location: 14437 - 14715 (+)
Type: null
Location: 14437 - 14715 (+)
Gene ID: ALT831_02429
Type: TC
Location: 14575 - 17274 (-)
Type: TC
Location: 14575 - 17274 (-)
Gene ID: ALT831_02430
Type: CAZyme
Location: 17956 - 19161 (+)
Type: CAZyme
Location: 17956 - 19161 (+)
Gene ID: ALT831_02431
Type: CAZyme
Location: 19192 - 20661 (+)
Type: CAZyme
Location: 19192 - 20661 (+)
Gene ID: ALT831_02432
Type: CAZyme
Location: 20675 - 21877 (+)
Type: CAZyme
Location: 20675 - 21877 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Alteromonadaceae
Genus
Alteromonas
Species
Alteromonas macleodii
Gene Composition
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