Cluster: PUL0400
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate: alginate
- Genome ID: PUL0400
- CGC Family ID: CGCFAM_04145
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | CABDWQ010000001 | ALT831_00941 | 1 | 2955 | + | TonB_dep_Rec_b-barrel | Plug | OMP_b-brl_3 |
| NULL(UNKNOWN) | CABDWQ010000001 | ALT831_00942 | 2965 | 3213 | + | NULL(UNKNOWN) |
| pfam | CABDWQ010000001 | ALT831_00943 | 3346 | 4224 | + | 3HCDH_N | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | KARI_N | NAD_binding_11 |
| CAZyme | CABDWQ010000001 | ALT831_00944 | 4277 | 6565 | + | PL6 | PL6_1 |
| CAZyme | CABDWQ010000001 | ALT831_00945 | 6572 | 8776 | + | PL17 | PL17_2 |
| STP | CABDWQ010000001 | ALT831_00946 | 8795 | 9139 | + | AraC_binding |
| TC | CABDWQ010000001 | ALT831_00947 | 9142 | 10437 | + | 2.A.1.14.25 |
| STP | CABDWQ010000001 | ALT831_00948 | 10505 | 11440 | + | PfkB |
| pfam | CABDWQ010000001 | ALT831_00949 | 11566 | 12183 | + | Aldolase |
| TF | CABDWQ010000001 | ALT831_00950 | 12546 | 13286 | + | GntR |
| CAZyme | CABDWQ010000001 | ALT831_00951 | 13413 | 14846 | - | CBM32 | PL7_5 |
| TC | CABDWQ010000001 | ALT831_00952 | 14920 | 18024 | - | 1.B.14.12.1 |
| CAZyme | CABDWQ010000001 | ALT831_00953 | 18501 | 21020 | + | PL6_3 |
| CAZyme | CABDWQ010000001 | ALT831_00954 | 21223 | 22314 | - | PL7_5 |
Gene ID: ALT831_00941
Type: pfam
Location: 1 - 2955 (+)
Type: pfam
Location: 1 - 2955 (+)
Gene ID: ALT831_00942
Type: null
Location: 2965 - 3213 (+)
Type: null
Location: 2965 - 3213 (+)
Gene ID: ALT831_00943
Type: pfam
Location: 3346 - 4224 (+)
Type: pfam
Location: 3346 - 4224 (+)
Gene ID: ALT831_00944
Type: CAZyme
Location: 4277 - 6565 (+)
Type: CAZyme
Location: 4277 - 6565 (+)
Gene ID: ALT831_00945
Type: CAZyme
Location: 6572 - 8776 (+)
Type: CAZyme
Location: 6572 - 8776 (+)
Gene ID: ALT831_00946
Type: STP
Location: 8795 - 9139 (+)
Type: STP
Location: 8795 - 9139 (+)
Gene ID: ALT831_00947
Type: TC
Location: 9142 - 10437 (+)
Type: TC
Location: 9142 - 10437 (+)
Gene ID: ALT831_00948
Type: STP
Location: 10505 - 11440 (+)
Type: STP
Location: 10505 - 11440 (+)
Gene ID: ALT831_00949
Type: pfam
Location: 11566 - 12183 (+)
Type: pfam
Location: 11566 - 12183 (+)
Gene ID: ALT831_00950
Type: TF
Location: 12546 - 13286 (+)
Type: TF
Location: 12546 - 13286 (+)
Gene ID: ALT831_00951
Type: CAZyme
Location: 13413 - 14846 (-)
Type: CAZyme
Location: 13413 - 14846 (-)
Gene ID: ALT831_00952
Type: TC
Location: 14920 - 18024 (-)
Type: TC
Location: 14920 - 18024 (-)
Gene ID: ALT831_00953
Type: CAZyme
Location: 18501 - 21020 (+)
Type: CAZyme
Location: 18501 - 21020 (+)
Gene ID: ALT831_00954
Type: CAZyme
Location: 21223 - 22314 (-)
Type: CAZyme
Location: 21223 - 22314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Alteromonadaceae
Genus
Alteromonas
Species
Alteromonas macleodii
Gene Composition
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