Cluster: PUL0399
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: PUL0399
- CGC Family ID: CGCFAM_06410
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| sulfatase | CP000033 | LBA1457 | 1 | 987 | - | S1_4 |
| pfam | CP000033 | LBA1458 | 989 | 2452 | - | GalP_UDP_transf | GalP_UDP_tr_C |
| pfam | CP000033 | LBA1459 | 2472 | 3635 | - | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| pfam | CP000033 | LBA1460 | 3852 | 4871 | - | Muc_B2 | Muc_B2 |
| STP | CP000033 | LBA1461 | 5036 | 5665 | - | TetR_N |
| CAZyme | CP000033 | LBA1462 | 5787 | 7790 | - | GH42 |
| TC | CP000033 | LBA1463 | 7801 | 9720 | - | 2.A.2.2.2 |
| pfam | CP000033 | LBA1464 | 9917 | 11074 | - | OrfB_IS605 | Cas12f1-like_TNB |
| TF | CP000033 | LBA1465 | 11427 | 12434 | - | LacI |
| CAZyme | CP000033 | LBA1467 | 12660 | 14546 | + | GH2 |
| pfam | CP000033 | LBA1468 | 14530 | 15480 | + | Bgal_small_N |
| pfam | CP000033 | LBA1469 | 15562 | 16554 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
Gene ID: LBA1457
Type: sulfatase
Location: 1 - 987 (-)
Type: sulfatase
Location: 1 - 987 (-)
Gene ID: LBA1458
Type: pfam
Location: 989 - 2452 (-)
Type: pfam
Location: 989 - 2452 (-)
Gene ID: LBA1459
Type: pfam
Location: 2472 - 3635 (-)
Type: pfam
Location: 2472 - 3635 (-)
Gene ID: LBA1460
Type: pfam
Location: 3852 - 4871 (-)
Type: pfam
Location: 3852 - 4871 (-)
Gene ID: LBA1461
Type: STP
Location: 5036 - 5665 (-)
Type: STP
Location: 5036 - 5665 (-)
Gene ID: LBA1462
Type: CAZyme
Location: 5787 - 7790 (-)
Type: CAZyme
Location: 5787 - 7790 (-)
Gene ID: LBA1463
Type: TC
Location: 7801 - 9720 (-)
Type: TC
Location: 7801 - 9720 (-)
Gene ID: LBA1464
Type: pfam
Location: 9917 - 11074 (-)
Type: pfam
Location: 9917 - 11074 (-)
Gene ID: LBA1465
Type: TF
Location: 11427 - 12434 (-)
Type: TF
Location: 11427 - 12434 (-)
Gene ID: LBA1467
Type: CAZyme
Location: 12660 - 14546 (+)
Type: CAZyme
Location: 12660 - 14546 (+)
Gene ID: LBA1468
Type: pfam
Location: 14530 - 15480 (+)
Type: pfam
Location: 14530 - 15480 (+)
Gene ID: LBA1469
Type: pfam
Location: 15562 - 16554 (+)
Type: pfam
Location: 15562 - 16554 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus acidophilus
Gene Composition
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