Cluster: PUL0392_HRGMv2_3983_C2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: xylan
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_02273
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0392_HRGMv2_3983_C2 | HRGMv2_3983_22_37 | 43319 | 44965 | + | CE20 | CE20 |
| TC | PUL0392_HRGMv2_3983_C2 | HRGMv2_3983_22_38 | 44987 | 46471 | + | 2.A.2.3.6 |
| CAZyme | PUL0392_HRGMv2_3983_C2 | HRGMv2_3983_22_41 | 48789 | 50927 | + | GH67 |
| TF | PUL0392_HRGMv2_3983_C2 | HRGMv2_3983_22_44 | 53416 | 53976 | + | GerE |
| TC | PUL0392_HRGMv2_3983_C2 | HRGMv2_3983_22_46 | 55176 | 58766 | + | 1.B.14.6.1 |
| STP | PUL0392_HRGMv2_3983_C2 | HRGMv2_3983_22_47 | 58787 | 60214 | + | TPR_2 |
| pfam | PUL0392_HRGMv2_3983_C2 | HRGMv2_3983_22_48 | 60232 | 62745 | + | DUF4953 | DUF5117 | DUF5118 |
Gene ID: HRGMv2_3983_22_37
Type: CAZyme
Location: 43319 - 44965 (+)
Type: CAZyme
Location: 43319 - 44965 (+)
Gene ID: HRGMv2_3983_22_38
Type: TC
Location: 44987 - 46471 (+)
Type: TC
Location: 44987 - 46471 (+)
Gene ID: HRGMv2_3983_22_41
Type: CAZyme
Location: 48789 - 50927 (+)
Type: CAZyme
Location: 48789 - 50927 (+)
Gene ID: HRGMv2_3983_22_44
Type: TF
Location: 53416 - 53976 (+)
Type: TF
Location: 53416 - 53976 (+)
Gene ID: HRGMv2_3983_22_46
Type: TC
Location: 55176 - 58766 (+)
Type: TC
Location: 55176 - 58766 (+)
Gene ID: HRGMv2_3983_22_47
Type: STP
Location: 58787 - 60214 (+)
Type: STP
Location: 58787 - 60214 (+)
Gene ID: HRGMv2_3983_22_48
Type: pfam
Location: 60232 - 62745 (+)
Type: pfam
Location: 60232 - 62745 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Composition
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