Cluster: PUL0390
🧬 Cluster Details
- Gene Count: 24
- CAZyme Count: 6
- Substrate: xylan
- Genome ID: PUL0390
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_000853 | TM_RS00250 | 1 | 2025 | - | GH67 |
| TC | NC_000853 | TM_RS00255 | 2082 | 4055 | - | 3.A.1.5.29 |
| TC | NC_000853 | TM_RS00260 | 4069 | 5085 | - | 3.A.1.5.29 |
| TC | NC_000853 | TM_RS00265 | 5082 | 6077 | - | 3.A.1.5.29 |
| TC | NC_000853 | TM_RS00270 | 6091 | 7179 | - | 3.A.1.5.29 |
| TC | NC_000853 | TM_RS00275 | 7208 | 8194 | - | 3.A.1.5.29 |
| CAZyme | NC_000853 | TM_RS00280 | 8513 | 11692 | + | CBM22 | CBM22 | CBM9 | CBM9 | GH10 |
| CAZyme | NC_000853 | TM_RS00285 | 11748 | 12287 | + | CBM22 |
| NULL(UNKNOWN) | NC_000853 | TM_RS00290 | 12334 | 12780 | - | NULL(UNKNOWN) |
| pfam | NC_000853 | TM_RS00295 | 12792 | 14147 | - | UxaC |
| TF | NC_000853 | TM_RS00300 | 14249 | 14989 | + | HTH_11 |
| pfam | NC_000853 | TM_RS00305 | 15058 | 15669 | + | Aldolase |
| STP | NC_000853 | TM_RS00310 | 15666 | 16685 | + | PfkB |
| pfam | NC_000853 | TM_RS00315 | 16698 | 18317 | + | Mannitol_dh | Mannitol_dh_C |
| pfam | NC_000853 | TM_RS00320 | 18314 | 19396 | + | AP_endonuc_2 | UxuA |
| CAZyme | NC_000853 | TM_RS00325 | 19418 | 20461 | - | GH10 |
| TC | NC_000853 | TM_RS00330 | 20681 | 22558 | + | 3.A.1.5.13 |
| TC | NC_000853 | TM_RS00335 | 22635 | 23642 | + | 3.A.1.5.13 |
| TC | NC_000853 | TM_RS00340 | 23659 | 24513 | + | 3.A.1.5.13 |
| TC | NC_000853 | TM_RS00345 | 24515 | 25522 | + | 3.A.1.5.13 |
| TC | NC_000853 | TM_RS00350 | 25509 | 26471 | + | 3.A.1.5.13 |
| CAZyme | NC_000853 | TM_RS00355 | 26509 | 28845 | + | GH3 |
| CAZyme | NC_000853 | TM_RS00360 | 28850 | 29827 | + | CE7 |
| TC | NC_000853 | TM_RS00365 | 29810 | 29827 | - | 3.A.1.14.8 |
Gene ID: TM_RS00250
Type: CAZyme
Location: 1 - 2025 (-)
Type: CAZyme
Location: 1 - 2025 (-)
Gene ID: TM_RS00255
Type: TC
Location: 2082 - 4055 (-)
Type: TC
Location: 2082 - 4055 (-)
Gene ID: TM_RS00260
Type: TC
Location: 4069 - 5085 (-)
Type: TC
Location: 4069 - 5085 (-)
Gene ID: TM_RS00265
Type: TC
Location: 5082 - 6077 (-)
Type: TC
Location: 5082 - 6077 (-)
Gene ID: TM_RS00270
Type: TC
Location: 6091 - 7179 (-)
Type: TC
Location: 6091 - 7179 (-)
Gene ID: TM_RS00275
Type: TC
Location: 7208 - 8194 (-)
Type: TC
Location: 7208 - 8194 (-)
Gene ID: TM_RS00280
Type: CAZyme
Location: 8513 - 11692 (+)
Type: CAZyme
Location: 8513 - 11692 (+)
Gene ID: TM_RS00285
Type: CAZyme
Location: 11748 - 12287 (+)
Type: CAZyme
Location: 11748 - 12287 (+)
Gene ID: TM_RS00290
Type: null
Location: 12334 - 12780 (-)
Type: null
Location: 12334 - 12780 (-)
Gene ID: TM_RS00295
Type: pfam
Location: 12792 - 14147 (-)
Type: pfam
Location: 12792 - 14147 (-)
Gene ID: TM_RS00300
Type: TF
Location: 14249 - 14989 (+)
Type: TF
Location: 14249 - 14989 (+)
Gene ID: TM_RS00305
Type: pfam
Location: 15058 - 15669 (+)
Type: pfam
Location: 15058 - 15669 (+)
Gene ID: TM_RS00310
Type: STP
Location: 15666 - 16685 (+)
Type: STP
Location: 15666 - 16685 (+)
Gene ID: TM_RS00315
Type: pfam
Location: 16698 - 18317 (+)
Type: pfam
Location: 16698 - 18317 (+)
Gene ID: TM_RS00320
Type: pfam
Location: 18314 - 19396 (+)
Type: pfam
Location: 18314 - 19396 (+)
Gene ID: TM_RS00325
Type: CAZyme
Location: 19418 - 20461 (-)
Type: CAZyme
Location: 19418 - 20461 (-)
Gene ID: TM_RS00330
Type: TC
Location: 20681 - 22558 (+)
Type: TC
Location: 20681 - 22558 (+)
Gene ID: TM_RS00335
Type: TC
Location: 22635 - 23642 (+)
Type: TC
Location: 22635 - 23642 (+)
Gene ID: TM_RS00340
Type: TC
Location: 23659 - 24513 (+)
Type: TC
Location: 23659 - 24513 (+)
Gene ID: TM_RS00345
Type: TC
Location: 24515 - 25522 (+)
Type: TC
Location: 24515 - 25522 (+)
Gene ID: TM_RS00350
Type: TC
Location: 25509 - 26471 (+)
Type: TC
Location: 25509 - 26471 (+)
Gene ID: TM_RS00355
Type: CAZyme
Location: 26509 - 28845 (+)
Type: CAZyme
Location: 26509 - 28845 (+)
Gene ID: TM_RS00360
Type: CAZyme
Location: 28850 - 29827 (+)
Type: CAZyme
Location: 28850 - 29827 (+)
Gene ID: TM_RS00365
Type: TC
Location: 29810 - 29827 (-)
Type: TC
Location: 29810 - 29827 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Thermotogota
Class
Thermotogae
Order
Thermotogales
Family
Thermotogaceae
Genus
Thermotoga
Species
Thermotoga maritima
Gene Composition
Loading chart...
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