Cluster: PUL0381
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: chitin
- Genome ID: PUL0381
- CGC Family ID: CGCFAM_06438
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_002505 | VC_RS06245 | 1 | 1296 | - | CE4 |
| TC | NC_002505 | VC_RS06250 | 1539 | 1844 | + | 4.A.3.2.6 |
| TC | NC_002505 | VC_RS06255 | 1932 | 3263 | + | 4.A.3.2.6 |
| TC | NC_002505 | VC_RS06260 | 3310 | 3645 | + | 4.A.3.2.6 |
| CAZyme | NC_002505 | VC_RS06265 | 3627 | 4949 | + | GH4 |
| pfam | NC_002505 | VC_RS06270 | 4972 | 5730 | + | YdjC |
Gene ID: VC_RS06245
Type: CAZyme
Location: 1 - 1296 (-)
Type: CAZyme
Location: 1 - 1296 (-)
Gene ID: VC_RS06250
Type: TC
Location: 1539 - 1844 (+)
Type: TC
Location: 1539 - 1844 (+)
Gene ID: VC_RS06255
Type: TC
Location: 1932 - 3263 (+)
Type: TC
Location: 1932 - 3263 (+)
Gene ID: VC_RS06260
Type: TC
Location: 3310 - 3645 (+)
Type: TC
Location: 3310 - 3645 (+)
Gene ID: VC_RS06265
Type: CAZyme
Location: 3627 - 4949 (+)
Type: CAZyme
Location: 3627 - 4949 (+)
Gene ID: VC_RS06270
Type: pfam
Location: 4972 - 5730 (+)
Type: pfam
Location: 4972 - 5730 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Species
Vibrio cholerae
Gene Composition
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