Cluster: PUL0380_Rep_490_C2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0380_Rep_490_C2 | Rep_490_c_2_2673 | 3514173 | 3517580 | + | 1.B.14.6.13 |
| TC | PUL0380_Rep_490_C2 | Rep_490_c_2_2674 | 3517597 | 3519210 | + | 8.A.46.2.2 |
| pfam | PUL0380_Rep_490_C2 | Rep_490_c_2_2675 | 3519235 | 3520311 | + | GH18_BT1044-like |
| pfam | PUL0380_Rep_490_C2 | Rep_490_c_2_2676 | 3520320 | 3521474 | + | BT_3987-like_N | Laminin_G_3 |
| CAZyme | PUL0380_Rep_490_C2 | Rep_490_c_2_2677 | 3521514 | 3522938 | + | GH18 |
| pfam | PUL0380_Rep_490_C2 | Rep_490_c_2_2678 | 3522969 | 3524303 | + | F5_F8_type_C | DUF4989 | F5_F8_type_C_2 |
| pfam | PUL0380_Rep_490_C2 | Rep_490_c_2_2679 | 3524551 | 3524985 | - | DUF6078 |
| CAZyme | PUL0380_Rep_490_C2 | Rep_490_c_2_2680 | 3525176 | 3527446 | - | GH92 |
| CAZyme | PUL0380_Rep_490_C2 | Rep_490_c_2_2681 | 3527470 | 3529755 | - | GH92 |
| STP | PUL0380_Rep_490_C2 | Rep_490_c_2_2682 | 3529787 | 3530782 | - | FecR |
| TF | PUL0380_Rep_490_C2 | Rep_490_c_2_2683 | 3530835 | 3531389 | - | GerE |
| CAZyme | PUL0380_Rep_490_C2 | Rep_490_c_2_2684 | 3531417 | 3533648 | - | GH92 |
Gene ID: Rep_490_c_2_2673
Type: TC
Location: 3514173 - 3517580 (+)
Type: TC
Location: 3514173 - 3517580 (+)
Gene ID: Rep_490_c_2_2674
Type: TC
Location: 3517597 - 3519210 (+)
Type: TC
Location: 3517597 - 3519210 (+)
Gene ID: Rep_490_c_2_2675
Type: pfam
Location: 3519235 - 3520311 (+)
Type: pfam
Location: 3519235 - 3520311 (+)
Gene ID: Rep_490_c_2_2676
Type: pfam
Location: 3520320 - 3521474 (+)
Type: pfam
Location: 3520320 - 3521474 (+)
Gene ID: Rep_490_c_2_2677
Type: CAZyme
Location: 3521514 - 3522938 (+)
Type: CAZyme
Location: 3521514 - 3522938 (+)
Gene ID: Rep_490_c_2_2678
Type: pfam
Location: 3522969 - 3524303 (+)
Type: pfam
Location: 3522969 - 3524303 (+)
Gene ID: Rep_490_c_2_2679
Type: pfam
Location: 3524551 - 3524985 (-)
Type: pfam
Location: 3524551 - 3524985 (-)
Gene ID: Rep_490_c_2_2680
Type: CAZyme
Location: 3525176 - 3527446 (-)
Type: CAZyme
Location: 3525176 - 3527446 (-)
Gene ID: Rep_490_c_2_2681
Type: CAZyme
Location: 3527470 - 3529755 (-)
Type: CAZyme
Location: 3527470 - 3529755 (-)
Gene ID: Rep_490_c_2_2682
Type: STP
Location: 3529787 - 3530782 (-)
Type: STP
Location: 3529787 - 3530782 (-)
Gene ID: Rep_490_c_2_2683
Type: TF
Location: 3530835 - 3531389 (-)
Type: TF
Location: 3530835 - 3531389 (-)
Gene ID: Rep_490_c_2_2684
Type: CAZyme
Location: 3531417 - 3533648 (-)
Type: CAZyme
Location: 3531417 - 3533648 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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