Cluster: PUL0366
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: PUL0366
- CGC Family ID: CGCFAM_00443
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | AF228498 | agaR | 34 | 843 | - | HTH_DeoR |
| pfam | AF228498 | kbaZ | 1092 | 2372 | + | GatZ_KbaZ-like |
| TC | AF228498 | agaV | 2359 | 2868 | + | 4.A.6.1.4 |
| TC | AF228498 | agaW | 2879 | 3658 | + | 4.A.6.1.4 |
| TC | AF228498 | agaE | 3648 | 4526 | + | 4.A.6.1.4 |
| TC | AF228498 | agaF | 4544 | 4978 | + | 4.A.6.1.16 |
| CAZyme | AF228498 | agaA | 4954 | 6108 | + | CE9 |
| STP | AF228498 | agaS | 6457 | 7611 | + | SIS | SIS |
| pfam | AF228498 | kbaY | 7624 | 8484 | + | F_bP_aldolase |
| TC | AF228498 | agaB | 8651 | 9127 | + | 4.A.6.1.5 |
| TC | AF228498 | agaC | 9166 | 9969 | + | 4.A.6.1.5 |
| TC | AF228498 | agaD | 9959 | 10750 | + | 4.A.6.1.5 |
| sulfatase | AF228498 | agaI | 10751 | 11506 | + | S1_9 |
Gene ID: agaR
Type: TF
Location: 34 - 843 (-)
Type: TF
Location: 34 - 843 (-)
Gene ID: kbaZ
Type: pfam
Location: 1092 - 2372 (+)
Type: pfam
Location: 1092 - 2372 (+)
Gene ID: agaV
Type: TC
Location: 2359 - 2868 (+)
Type: TC
Location: 2359 - 2868 (+)
Gene ID: agaW
Type: TC
Location: 2879 - 3658 (+)
Type: TC
Location: 2879 - 3658 (+)
Gene ID: agaE
Type: TC
Location: 3648 - 4526 (+)
Type: TC
Location: 3648 - 4526 (+)
Gene ID: agaF
Type: TC
Location: 4544 - 4978 (+)
Type: TC
Location: 4544 - 4978 (+)
Gene ID: agaA
Type: CAZyme
Location: 4954 - 6108 (+)
Type: CAZyme
Location: 4954 - 6108 (+)
Gene ID: agaS
Type: STP
Location: 6457 - 7611 (+)
Type: STP
Location: 6457 - 7611 (+)
Gene ID: kbaY
Type: pfam
Location: 7624 - 8484 (+)
Type: pfam
Location: 7624 - 8484 (+)
Gene ID: agaB
Type: TC
Location: 8651 - 9127 (+)
Type: TC
Location: 8651 - 9127 (+)
Gene ID: agaC
Type: TC
Location: 9166 - 9969 (+)
Type: TC
Location: 9166 - 9969 (+)
Gene ID: agaD
Type: TC
Location: 9959 - 10750 (+)
Type: TC
Location: 9959 - 10750 (+)
Gene ID: agaI
Type: sulfatase
Location: 10751 - 11506 (+)
Type: sulfatase
Location: 10751 - 11506 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Composition
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