Cluster: PUL0354_Rep_490_C1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0354_Rep_490_C1 | Rep_490_c_2_1560 | 1946135 | 1947847 | - | GH93 |
| pfam | PUL0354_Rep_490_C1 | Rep_490_c_2_1561 | 1947926 | 1949800 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0354_Rep_490_C1 | Rep_490_c_2_1562 | 1949809 | 1952883 | - | 1.B.14.6.1 |
| CAZyme | PUL0354_Rep_490_C1 | Rep_490_c_2_1563 | 1952934 | 1953926 | - | GH43_31 |
| pfam | PUL0354_Rep_490_C1 | Rep_490_c_2_1564 | 1953972 | 1955330 | - | NHL | TIG | SGL |
| TF | PUL0354_Rep_490_C1 | Rep_490_c_2_1565 | 1955816 | 1959796 | - | HTH_AraC | HTH_AraC |
| CAZyme | PUL0354_Rep_490_C1 | Rep_490_c_2_1566 | 1960431 | 1961414 | - | GH43_31 |
| CAZyme | PUL0354_Rep_490_C1 | Rep_490_c_2_1567 | 1961436 | 1963502 | - | GH182 |
Gene ID: Rep_490_c_2_1560
Type: CAZyme
Location: 1946135 - 1947847 (-)
Type: CAZyme
Location: 1946135 - 1947847 (-)
Gene ID: Rep_490_c_2_1561
Type: pfam
Location: 1947926 - 1949800 (-)
Type: pfam
Location: 1947926 - 1949800 (-)
Gene ID: Rep_490_c_2_1562
Type: TC
Location: 1949809 - 1952883 (-)
Type: TC
Location: 1949809 - 1952883 (-)
Gene ID: Rep_490_c_2_1563
Type: CAZyme
Location: 1952934 - 1953926 (-)
Type: CAZyme
Location: 1952934 - 1953926 (-)
Gene ID: Rep_490_c_2_1564
Type: pfam
Location: 1953972 - 1955330 (-)
Type: pfam
Location: 1953972 - 1955330 (-)
Gene ID: Rep_490_c_2_1565
Type: TF
Location: 1955816 - 1959796 (-)
Type: TF
Location: 1955816 - 1959796 (-)
Gene ID: Rep_490_c_2_1566
Type: CAZyme
Location: 1960431 - 1961414 (-)
Type: CAZyme
Location: 1960431 - 1961414 (-)
Gene ID: Rep_490_c_2_1567
Type: CAZyme
Location: 1961436 - 1963502 (-)
Type: CAZyme
Location: 1961436 - 1963502 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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