Cluster: PUL0340
🧬 Cluster Details
- Gene Count: 37
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: PUL0340
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | LT674130.1 | SIP56454.1 | 37 | 309 | + | HTH_psq |
| CAZyme | LT674130.1 | SIP56455.1 | 375 | 1535 | - | GH5_2 |
| TC | LT674130.1 | SIP56456.1 | 1557 | 4205 | - | 3.A.3.5.15 |
| STP | LT674130.1 | SIP56457.1 | 4261 | 4638 | - | HMA |
| pfam | LT674130.1 | SIP56458.1 | 4663 | 4974 | - | Trns_repr_metal |
| STP | LT674130.1 | SIP56459.1 | 5702 | 6895 | - | Aminotran_1_2 |
| TF | LT674130.1 | SIP56460.1 | 6982 | 7674 | - | HTH_3 |
| pfam | LT674130.1 | SIP56461.1 | 7849 | 8079 | + | Tn916-Xis | HTH_17 |
| NULL(UNKNOWN) | LT674130.1 | SIP56462.1 | 8161 | 8538 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LT674130.1 | SIP56463.1 | 8538 | 8843 | + | NULL(UNKNOWN) |
| pfam | LT674130.1 | SIP56464.1 | 8819 | 10540 | + | MobA_MobL |
| pfam | LT674130.1 | SIP56465.1 | 10479 | 11228 | + | DUF6040 |
| TF | LT674130.1 | SIP56466.1 | 11359 | 12171 | + | Trans_reg_C |
| STP | LT674130.1 | SIP56467.1 | 12172 | 13104 | + | HATPase_c | HisKA |
| pfam | LT674130.1 | SIP56468.1 | 13459 | 15138 | + | SNF2-rel_dom | Helicase_C | ResIII |
| TF | LT674130.1 | SIP56469.1 | 15179 | 15406 | + | MerR |
| NULL(UNKNOWN) | LT674130.1 | SIP56470.1 | 15528 | 15836 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LT674130.1 | SIP56471.1 | 15790 | 15966 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LT674130.1 | SIP56472.1 | 15956 | 16168 | + | NULL(UNKNOWN) |
| pfam | LT674130.1 | SIP56473.1 | 16223 | 16984 | + | HTH_36 |
| pfam | LT674130.1 | SIP56474.1 | 17065 | 17727 | + | IstB_IS21 | AFG1_ATPase |
| pfam | LT674130.1 | SIP56475.1 | 17728 | 19074 | + | DnaB_C |
| NULL(UNKNOWN) | LT674130.1 | SIP56476.1 | 19064 | 19285 | + | NULL(UNKNOWN) |
| STP | LT674130.1 | SIP56477.1 | 19358 | 19825 | + | Sigma70_r4_2 |
| TF | LT674130.1 | SIP56478.1 | 19825 | 20088 | + | HTH_3 |
| TF | LT674130.1 | SIP56479.1 | 20108 | 20548 | + | HTH_3 |
| TF | LT674130.1 | SIP56480.1 | 20594 | 20971 | - | HTH_3 |
| pfam | LT674130.1 | SIP56481.1 | 21231 | 21749 | + | Thy1 |
| NULL(UNKNOWN) | LT674130.1 | SIP56482.1 | 21809 | 21940 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LT674130.1 | SIP56483.1 | 21940 | 22488 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LT674130.1 | SIP56484.1 | 22481 | 22645 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LT674130.1 | SIP56485.1 | 22639 | 22827 | + | NULL(UNKNOWN) |
| pfam | LT674130.1 | SIP56486.1 | 22878 | 24368 | + | Terminase_6C |
| pfam | LT674130.1 | SIP56487.1 | 24428 | 25987 | + | SPP1_portal |
| pfam | LT674130.1 | SIP56488.1 | 26022 | 28001 | + | Phage_Mu_F |
| NULL(UNKNOWN) | LT674130.1 | SIP56489.1 | 28001 | 28207 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LT674130.1 | SIP56490.1 | 28419 | 29087 | + | NULL(UNKNOWN) |
Gene ID: SIP56454.1
Type: TF
Location: 37 - 309 (+)
Type: TF
Location: 37 - 309 (+)
Gene ID: SIP56455.1
Type: CAZyme
Location: 375 - 1535 (-)
Type: CAZyme
Location: 375 - 1535 (-)
Gene ID: SIP56456.1
Type: TC
Location: 1557 - 4205 (-)
Type: TC
Location: 1557 - 4205 (-)
Gene ID: SIP56457.1
Type: STP
Location: 4261 - 4638 (-)
Type: STP
Location: 4261 - 4638 (-)
Gene ID: SIP56458.1
Type: pfam
Location: 4663 - 4974 (-)
Type: pfam
Location: 4663 - 4974 (-)
Gene ID: SIP56459.1
Type: STP
Location: 5702 - 6895 (-)
Type: STP
Location: 5702 - 6895 (-)
Gene ID: SIP56460.1
Type: TF
Location: 6982 - 7674 (-)
Type: TF
Location: 6982 - 7674 (-)
Gene ID: SIP56461.1
Type: pfam
Location: 7849 - 8079 (+)
Type: pfam
Location: 7849 - 8079 (+)
Gene ID: SIP56462.1
Type: null
Location: 8161 - 8538 (+)
Type: null
Location: 8161 - 8538 (+)
Gene ID: SIP56463.1
Type: null
Location: 8538 - 8843 (+)
Type: null
Location: 8538 - 8843 (+)
Gene ID: SIP56464.1
Type: pfam
Location: 8819 - 10540 (+)
Type: pfam
Location: 8819 - 10540 (+)
Gene ID: SIP56465.1
Type: pfam
Location: 10479 - 11228 (+)
Type: pfam
Location: 10479 - 11228 (+)
Gene ID: SIP56466.1
Type: TF
Location: 11359 - 12171 (+)
Type: TF
Location: 11359 - 12171 (+)
Gene ID: SIP56467.1
Type: STP
Location: 12172 - 13104 (+)
Type: STP
Location: 12172 - 13104 (+)
Gene ID: SIP56468.1
Type: pfam
Location: 13459 - 15138 (+)
Type: pfam
Location: 13459 - 15138 (+)
Gene ID: SIP56469.1
Type: TF
Location: 15179 - 15406 (+)
Type: TF
Location: 15179 - 15406 (+)
Gene ID: SIP56470.1
Type: null
Location: 15528 - 15836 (+)
Type: null
Location: 15528 - 15836 (+)
Gene ID: SIP56471.1
Type: null
Location: 15790 - 15966 (+)
Type: null
Location: 15790 - 15966 (+)
Gene ID: SIP56472.1
Type: null
Location: 15956 - 16168 (+)
Type: null
Location: 15956 - 16168 (+)
Gene ID: SIP56473.1
Type: pfam
Location: 16223 - 16984 (+)
Type: pfam
Location: 16223 - 16984 (+)
Gene ID: SIP56474.1
Type: pfam
Location: 17065 - 17727 (+)
Type: pfam
Location: 17065 - 17727 (+)
Gene ID: SIP56475.1
Type: pfam
Location: 17728 - 19074 (+)
Type: pfam
Location: 17728 - 19074 (+)
Gene ID: SIP56476.1
Type: null
Location: 19064 - 19285 (+)
Type: null
Location: 19064 - 19285 (+)
Gene ID: SIP56477.1
Type: STP
Location: 19358 - 19825 (+)
Type: STP
Location: 19358 - 19825 (+)
Gene ID: SIP56478.1
Type: TF
Location: 19825 - 20088 (+)
Type: TF
Location: 19825 - 20088 (+)
Gene ID: SIP56479.1
Type: TF
Location: 20108 - 20548 (+)
Type: TF
Location: 20108 - 20548 (+)
Gene ID: SIP56480.1
Type: TF
Location: 20594 - 20971 (-)
Type: TF
Location: 20594 - 20971 (-)
Gene ID: SIP56481.1
Type: pfam
Location: 21231 - 21749 (+)
Type: pfam
Location: 21231 - 21749 (+)
Gene ID: SIP56482.1
Type: null
Location: 21809 - 21940 (+)
Type: null
Location: 21809 - 21940 (+)
Gene ID: SIP56483.1
Type: null
Location: 21940 - 22488 (+)
Type: null
Location: 21940 - 22488 (+)
Gene ID: SIP56484.1
Type: null
Location: 22481 - 22645 (+)
Type: null
Location: 22481 - 22645 (+)
Gene ID: SIP56485.1
Type: null
Location: 22639 - 22827 (+)
Type: null
Location: 22639 - 22827 (+)
Gene ID: SIP56486.1
Type: pfam
Location: 22878 - 24368 (+)
Type: pfam
Location: 22878 - 24368 (+)
Gene ID: SIP56487.1
Type: pfam
Location: 24428 - 25987 (+)
Type: pfam
Location: 24428 - 25987 (+)
Gene ID: SIP56488.1
Type: pfam
Location: 26022 - 28001 (+)
Type: pfam
Location: 26022 - 28001 (+)
Gene ID: SIP56489.1
Type: null
Location: 28001 - 28207 (+)
Type: null
Location: 28001 - 28207 (+)
Gene ID: SIP56490.1
Type: null
Location: 28419 - 29087 (+)
Type: null
Location: 28419 - 29087 (+)
Taxonomic Lineage
Gene Composition
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