Cluster: PUL0339
🧬 Cluster Details
- Gene Count: 24
- CAZyme Count: 4
- Substrate: xylan
- Genome ID: PUL0339
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | LT674129.1 | SIP56430.1 | 21 | 212 | + | NULL(UNKNOWN) |
| pfam | LT674129.1 | SIP56431.1 | 1161 | 1976 | - | rve | rve_2 | rve_3 |
| NULL(UNKNOWN) | LT674129.1 | SIP56432.1 | 2039 | 2410 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | LT674129.1 | SIP56433.1 | 2750 | 2950 | + | NULL(UNKNOWN) |
| pfam | LT674129.1 | SIP56434.1 | 2962 | 3366 | + | DUF5053 |
| pfam | LT674129.1 | SIP56435.1 | 3576 | 6047 | + | SNF2-rel_dom | DEAD | Helicase_C | ResIII |
| pfam | LT674129.1 | SIP56436.1 | 6154 | 7368 | + | Transposase_mut |
| CAZyme | LT674129.1 | SIP56437.1 | 7582 | 9738 | - | GH97 |
| TC | LT674129.1 | SIP56438.1 | 9964 | 10359 | + | 1.A.43.1.13 |
| pfam | LT674129.1 | SIP56439.1 | 10435 | 11715 | + | Enolase_C | Enolase_N | MR_MLE_C |
| CAZyme | LT674129.1 | SIP56440.1 | 11811 | 14063 | - | GH3 |
| peptidase | LT674129.1 | SIP56441.1 | 14107 | 15447 | - | M57.UPW |
| CAZyme | LT674129.1 | SIP56442.1 | 15465 | 16955 | - | GH16_3 |
| NULL(UNKNOWN) | LT674129.1 | SIP56443.1 | 17019 | 18446 | - | NULL(UNKNOWN) |
| pfam | LT674129.1 | SIP56444.1 | 18478 | 20049 | - | SusD_RagB | SusD-like_3 |
| TC | LT674129.1 | SIP56445.1 | 20070 | 23324 | - | 1.B.14.6.1 |
| pfam | LT674129.1 | SIP56446.1 | 23635 | 25956 | - | DUF5686 |
| pfam | LT674129.1 | SIP56447.1 | 26158 | 28347 | + | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| TF | LT674129.1 | SIP56448.1 | 28691 | 29392 | + | 0038753 |
| CAZyme | LT674129.1 | SIP56449.1 | 29480 | 31924 | + | GH20 |
| STP | LT674129.1 | SIP56450.1 | 32225 | 33172 | - | Pyr_redox_2 |
| pfam | LT674129.1 | SIP56451.1 | 33276 | 33920 | - | LolA_2 |
| TC | LT674129.1 | SIP56452.1 | 33935 | 36427 | - | 3.A.12.1.1 |
| TF | LT674129.1 | SIP56453.1 | 36713 | 37156 | - | 0043669 |
Gene ID: SIP56430.1
Type: null
Location: 21 - 212 (+)
Type: null
Location: 21 - 212 (+)
Gene ID: SIP56431.1
Type: pfam
Location: 1161 - 1976 (-)
Type: pfam
Location: 1161 - 1976 (-)
Gene ID: SIP56432.1
Type: null
Location: 2039 - 2410 (-)
Type: null
Location: 2039 - 2410 (-)
Gene ID: SIP56433.1
Type: null
Location: 2750 - 2950 (+)
Type: null
Location: 2750 - 2950 (+)
Gene ID: SIP56434.1
Type: pfam
Location: 2962 - 3366 (+)
Type: pfam
Location: 2962 - 3366 (+)
Gene ID: SIP56435.1
Type: pfam
Location: 3576 - 6047 (+)
Type: pfam
Location: 3576 - 6047 (+)
Gene ID: SIP56436.1
Type: pfam
Location: 6154 - 7368 (+)
Type: pfam
Location: 6154 - 7368 (+)
Gene ID: SIP56437.1
Type: CAZyme
Location: 7582 - 9738 (-)
Type: CAZyme
Location: 7582 - 9738 (-)
Gene ID: SIP56438.1
Type: TC
Location: 9964 - 10359 (+)
Type: TC
Location: 9964 - 10359 (+)
Gene ID: SIP56439.1
Type: pfam
Location: 10435 - 11715 (+)
Type: pfam
Location: 10435 - 11715 (+)
Gene ID: SIP56440.1
Type: CAZyme
Location: 11811 - 14063 (-)
Type: CAZyme
Location: 11811 - 14063 (-)
Gene ID: SIP56441.1
Type: peptidase
Location: 14107 - 15447 (-)
Type: peptidase
Location: 14107 - 15447 (-)
Gene ID: SIP56442.1
Type: CAZyme
Location: 15465 - 16955 (-)
Type: CAZyme
Location: 15465 - 16955 (-)
Gene ID: SIP56443.1
Type: null
Location: 17019 - 18446 (-)
Type: null
Location: 17019 - 18446 (-)
Gene ID: SIP56444.1
Type: pfam
Location: 18478 - 20049 (-)
Type: pfam
Location: 18478 - 20049 (-)
Gene ID: SIP56445.1
Type: TC
Location: 20070 - 23324 (-)
Type: TC
Location: 20070 - 23324 (-)
Gene ID: SIP56446.1
Type: pfam
Location: 23635 - 25956 (-)
Type: pfam
Location: 23635 - 25956 (-)
Gene ID: SIP56447.1
Type: pfam
Location: 26158 - 28347 (+)
Type: pfam
Location: 26158 - 28347 (+)
Gene ID: SIP56448.1
Type: TF
Location: 28691 - 29392 (+)
Type: TF
Location: 28691 - 29392 (+)
Gene ID: SIP56449.1
Type: CAZyme
Location: 29480 - 31924 (+)
Type: CAZyme
Location: 29480 - 31924 (+)
Gene ID: SIP56450.1
Type: STP
Location: 32225 - 33172 (-)
Type: STP
Location: 32225 - 33172 (-)
Gene ID: SIP56451.1
Type: pfam
Location: 33276 - 33920 (-)
Type: pfam
Location: 33276 - 33920 (-)
Gene ID: SIP56452.1
Type: TC
Location: 33935 - 36427 (-)
Type: TC
Location: 33935 - 36427 (-)
Gene ID: SIP56453.1
Type: TF
Location: 36713 - 37156 (-)
Type: TF
Location: 36713 - 37156 (-)
Taxonomic Lineage
Gene Composition
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