Cluster: PUL0337
🧬 Cluster Details
- Gene Count: 29
- CAZyme Count: 4
- Substrate: xylan
- Genome ID: PUL0337
- CGC Family ID: CGCFAM_04170
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | LT674127.1 | SIP56367.1 | 156 | 437 | - | Pept_S41_N |
| STP | LT674127.1 | SIP56368.1 | 622 | 1908 | + | Aminotran_1_2 |
| pfam | LT674127.1 | SIP56369.1 | 1931 | 2995 | + | Asn_synthase | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M |
| TF | LT674127.1 | SIP56370.1 | 2986 | 3648 | - | GerE |
| pfam | LT674127.1 | SIP56371.1 | 3739 | 4329 | - | DUF4251 |
| TC | LT674127.1 | SIP56372.1 | 4396 | 5832 | - | 2.A.35.1.6 |
| TC | LT674127.1 | SIP56373.1 | 6001 | 7176 | - | 2.A.1.36.3 |
| TF | LT674127.1 | SIP56374.1 | 7584 | 9284 | + | HTH_AraC | HTH_AraC |
| pfam | LT674127.1 | SIP56375.1 | 9449 | 10843 | - | Ras | MMR_HSR1 | FeoB_N | TrmE_N | MnmE_helical |
| pfam | LT674127.1 | SIP56376.1 | 11123 | 12001 | - | PNP_UDP_1 |
| pfam | LT674127.1 | SIP56377.1 | 12096 | 13097 | - | FloA |
| NULL(UNKNOWN) | LT674127.1 | SIP56378.1 | 13149 | 13619 | - | NULL(UNKNOWN) |
| STP | LT674127.1 | SIP56379.1 | 13628 | 15058 | - | TPR_2 |
| pfam | LT674127.1 | SIP56380.1 | 15225 | 15974 | + | ATP_bind_3 |
| TC | LT674127.1 | SIP56381.1 | 15996 | 16364 | + | 2.A.7.34.3 |
| pfam | LT674127.1 | SIP56382.1 | 16386 | 17402 | - | ApbE |
| TC | LT674127.1 | SIP56383.1 | 17429 | 18007 | - | 2.A.107.1.2 |
| pfam | LT674127.1 | SIP56384.1 | 18015 | 18797 | - | DUF6048 |
| pfam | LT674127.1 | SIP56385.1 | 18751 | 19236 | - | DUF6452 |
| CAZyme | LT674127.1 | SIP56386.1 | 19239 | 20192 | - | GT2 |
| pfam | LT674127.1 | SIP56387.1 | 20248 | 20793 | - | DUF4199 |
| TF | LT674127.1 | SIP56388.1 | 21490 | 24441 | + | GerE |
| TC | LT674127.1 | SIP56389.1 | 24732 | 27884 | + | 1.B.14.6.1 |
| pfam | LT674127.1 | SIP56390.1 | 27903 | 29498 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | LT674127.1 | SIP56391.1 | 29572 | 29781 | + | NULL(UNKNOWN) |
| CAZyme | LT674127.1 | SIP56392.1 | 29867 | 30811 | + | GH16_3 |
| CAZyme | LT674127.1 | SIP56393.1 | 30901 | 32193 | + | GH158 |
| CAZyme | LT674127.1 | SIP56394.1 | 32205 | 34448 | + | GH3 |
| pfam | LT674127.1 | SIP56395.1 | 34552 | 35766 | - | Enolase_C | Enolase_N | MR_MLE_C |
Gene ID: SIP56367.1
Type: pfam
Location: 156 - 437 (-)
Type: pfam
Location: 156 - 437 (-)
Gene ID: SIP56368.1
Type: STP
Location: 622 - 1908 (+)
Type: STP
Location: 622 - 1908 (+)
Gene ID: SIP56369.1
Type: pfam
Location: 1931 - 2995 (+)
Type: pfam
Location: 1931 - 2995 (+)
Gene ID: SIP56370.1
Type: TF
Location: 2986 - 3648 (-)
Type: TF
Location: 2986 - 3648 (-)
Gene ID: SIP56371.1
Type: pfam
Location: 3739 - 4329 (-)
Type: pfam
Location: 3739 - 4329 (-)
Gene ID: SIP56372.1
Type: TC
Location: 4396 - 5832 (-)
Type: TC
Location: 4396 - 5832 (-)
Gene ID: SIP56373.1
Type: TC
Location: 6001 - 7176 (-)
Type: TC
Location: 6001 - 7176 (-)
Gene ID: SIP56374.1
Type: TF
Location: 7584 - 9284 (+)
Type: TF
Location: 7584 - 9284 (+)
Gene ID: SIP56375.1
Type: pfam
Location: 9449 - 10843 (-)
Type: pfam
Location: 9449 - 10843 (-)
Gene ID: SIP56376.1
Type: pfam
Location: 11123 - 12001 (-)
Type: pfam
Location: 11123 - 12001 (-)
Gene ID: SIP56377.1
Type: pfam
Location: 12096 - 13097 (-)
Type: pfam
Location: 12096 - 13097 (-)
Gene ID: SIP56378.1
Type: null
Location: 13149 - 13619 (-)
Type: null
Location: 13149 - 13619 (-)
Gene ID: SIP56379.1
Type: STP
Location: 13628 - 15058 (-)
Type: STP
Location: 13628 - 15058 (-)
Gene ID: SIP56380.1
Type: pfam
Location: 15225 - 15974 (+)
Type: pfam
Location: 15225 - 15974 (+)
Gene ID: SIP56381.1
Type: TC
Location: 15996 - 16364 (+)
Type: TC
Location: 15996 - 16364 (+)
Gene ID: SIP56382.1
Type: pfam
Location: 16386 - 17402 (-)
Type: pfam
Location: 16386 - 17402 (-)
Gene ID: SIP56383.1
Type: TC
Location: 17429 - 18007 (-)
Type: TC
Location: 17429 - 18007 (-)
Gene ID: SIP56384.1
Type: pfam
Location: 18015 - 18797 (-)
Type: pfam
Location: 18015 - 18797 (-)
Gene ID: SIP56385.1
Type: pfam
Location: 18751 - 19236 (-)
Type: pfam
Location: 18751 - 19236 (-)
Gene ID: SIP56386.1
Type: CAZyme
Location: 19239 - 20192 (-)
Type: CAZyme
Location: 19239 - 20192 (-)
Gene ID: SIP56387.1
Type: pfam
Location: 20248 - 20793 (-)
Type: pfam
Location: 20248 - 20793 (-)
Gene ID: SIP56388.1
Type: TF
Location: 21490 - 24441 (+)
Type: TF
Location: 21490 - 24441 (+)
Gene ID: SIP56389.1
Type: TC
Location: 24732 - 27884 (+)
Type: TC
Location: 24732 - 27884 (+)
Gene ID: SIP56390.1
Type: pfam
Location: 27903 - 29498 (+)
Type: pfam
Location: 27903 - 29498 (+)
Gene ID: SIP56391.1
Type: null
Location: 29572 - 29781 (+)
Type: null
Location: 29572 - 29781 (+)
Gene ID: SIP56392.1
Type: CAZyme
Location: 29867 - 30811 (+)
Type: CAZyme
Location: 29867 - 30811 (+)
Gene ID: SIP56393.1
Type: CAZyme
Location: 30901 - 32193 (+)
Type: CAZyme
Location: 30901 - 32193 (+)
Gene ID: SIP56394.1
Type: CAZyme
Location: 32205 - 34448 (+)
Type: CAZyme
Location: 32205 - 34448 (+)
Gene ID: SIP56395.1
Type: pfam
Location: 34552 - 35766 (-)
Type: pfam
Location: 34552 - 35766 (-)
Taxonomic Lineage
Gene Composition
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