Cluster: PUL0336
🧬 Cluster Details
- Gene Count: 25
- CAZyme Count: 4
- Substrate: xylan
- Genome ID: PUL0336
- CGC Family ID: CGCFAM_04170
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | LT674126.1 | SIP56342.1 | 647 | 1024 | + | 1.A.43.1.1 |
| pfam | LT674126.1 | SIP56343.1 | 1038 | 1706 | + | Pentapeptide | Pentapeptide | Pentapeptide | Pentapeptide_4 | Pentapeptide_4 |
| pfam | LT674126.1 | SIP56344.1 | 1773 | 3062 | + | Enolase_C | Enolase_N | MR_MLE_C |
| CAZyme | LT674126.1 | SIP56345.1 | 3166 | 5409 | - | GH3 |
| CAZyme | LT674126.1 | SIP56346.1 | 5421 | 6713 | - | GH158 |
| CAZyme | LT674126.1 | SIP56347.1 | 6803 | 7747 | - | GH16_3 |
| NULL(UNKNOWN) | LT674126.1 | SIP56348.1 | 7833 | 8009 | - | NULL(UNKNOWN) |
| pfam | LT674126.1 | SIP56349.1 | 8115 | 9710 | - | SusD_RagB | SusD-like_3 |
| TC | LT674126.1 | SIP56350.1 | 9729 | 12881 | - | 1.B.14.6.1 |
| TF | LT674126.1 | SIP56351.1 | 13172 | 16123 | - | GerE |
| pfam | LT674126.1 | SIP56352.1 | 16820 | 17365 | + | DUF4199 |
| CAZyme | LT674126.1 | SIP56353.1 | 17421 | 18374 | + | GT2 |
| pfam | LT674126.1 | SIP56354.1 | 18377 | 18862 | + | DUF6452 |
| pfam | LT674126.1 | SIP56355.1 | 18816 | 19598 | + | DUF6048 |
| TC | LT674126.1 | SIP56356.1 | 19606 | 20184 | + | 2.A.107.1.2 |
| pfam | LT674126.1 | SIP56357.1 | 20211 | 21227 | + | ApbE |
| TC | LT674126.1 | SIP56358.1 | 21249 | 21617 | - | 2.A.7.34.3 |
| pfam | LT674126.1 | SIP56359.1 | 21639 | 22388 | - | ATP_bind_3 |
| STP | LT674126.1 | SIP56360.1 | 22555 | 23985 | + | TPR_2 |
| NULL(UNKNOWN) | LT674126.1 | SIP56361.1 | 23994 | 24464 | + | NULL(UNKNOWN) |
| pfam | LT674126.1 | SIP56362.1 | 24516 | 25517 | + | FloA |
| pfam | LT674126.1 | SIP56363.1 | 25612 | 26490 | + | PNP_UDP_1 |
| pfam | LT674126.1 | SIP56364.1 | 26770 | 28164 | + | Ras | MMR_HSR1 | FeoB_N | TrmE_N | MnmE_helical |
| TF | LT674126.1 | SIP56365.1 | 28329 | 30029 | - | HTH_AraC | HTH_AraC |
| TC | LT674126.1 | SIP56366.1 | 30437 | 31612 | + | 2.A.1.36.3 |
Gene ID: SIP56342.1
Type: TC
Location: 647 - 1024 (+)
Type: TC
Location: 647 - 1024 (+)
Gene ID: SIP56343.1
Type: pfam
Location: 1038 - 1706 (+)
Type: pfam
Location: 1038 - 1706 (+)
Gene ID: SIP56344.1
Type: pfam
Location: 1773 - 3062 (+)
Type: pfam
Location: 1773 - 3062 (+)
Gene ID: SIP56345.1
Type: CAZyme
Location: 3166 - 5409 (-)
Type: CAZyme
Location: 3166 - 5409 (-)
Gene ID: SIP56346.1
Type: CAZyme
Location: 5421 - 6713 (-)
Type: CAZyme
Location: 5421 - 6713 (-)
Gene ID: SIP56347.1
Type: CAZyme
Location: 6803 - 7747 (-)
Type: CAZyme
Location: 6803 - 7747 (-)
Gene ID: SIP56348.1
Type: null
Location: 7833 - 8009 (-)
Type: null
Location: 7833 - 8009 (-)
Gene ID: SIP56349.1
Type: pfam
Location: 8115 - 9710 (-)
Type: pfam
Location: 8115 - 9710 (-)
Gene ID: SIP56350.1
Type: TC
Location: 9729 - 12881 (-)
Type: TC
Location: 9729 - 12881 (-)
Gene ID: SIP56351.1
Type: TF
Location: 13172 - 16123 (-)
Type: TF
Location: 13172 - 16123 (-)
Gene ID: SIP56352.1
Type: pfam
Location: 16820 - 17365 (+)
Type: pfam
Location: 16820 - 17365 (+)
Gene ID: SIP56353.1
Type: CAZyme
Location: 17421 - 18374 (+)
Type: CAZyme
Location: 17421 - 18374 (+)
Gene ID: SIP56354.1
Type: pfam
Location: 18377 - 18862 (+)
Type: pfam
Location: 18377 - 18862 (+)
Gene ID: SIP56355.1
Type: pfam
Location: 18816 - 19598 (+)
Type: pfam
Location: 18816 - 19598 (+)
Gene ID: SIP56356.1
Type: TC
Location: 19606 - 20184 (+)
Type: TC
Location: 19606 - 20184 (+)
Gene ID: SIP56357.1
Type: pfam
Location: 20211 - 21227 (+)
Type: pfam
Location: 20211 - 21227 (+)
Gene ID: SIP56358.1
Type: TC
Location: 21249 - 21617 (-)
Type: TC
Location: 21249 - 21617 (-)
Gene ID: SIP56359.1
Type: pfam
Location: 21639 - 22388 (-)
Type: pfam
Location: 21639 - 22388 (-)
Gene ID: SIP56360.1
Type: STP
Location: 22555 - 23985 (+)
Type: STP
Location: 22555 - 23985 (+)
Gene ID: SIP56361.1
Type: null
Location: 23994 - 24464 (+)
Type: null
Location: 23994 - 24464 (+)
Gene ID: SIP56362.1
Type: pfam
Location: 24516 - 25517 (+)
Type: pfam
Location: 24516 - 25517 (+)
Gene ID: SIP56363.1
Type: pfam
Location: 25612 - 26490 (+)
Type: pfam
Location: 25612 - 26490 (+)
Gene ID: SIP56364.1
Type: pfam
Location: 26770 - 28164 (+)
Type: pfam
Location: 26770 - 28164 (+)
Gene ID: SIP56365.1
Type: TF
Location: 28329 - 30029 (-)
Type: TF
Location: 28329 - 30029 (-)
Gene ID: SIP56366.1
Type: TC
Location: 30437 - 31612 (+)
Type: TC
Location: 30437 - 31612 (+)
Taxonomic Lineage
Gene Composition
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