Cluster: PUL0330
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 10
- Substrate: pectin
- Genome ID: PUL0330
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CP016359 | GRFL_2155 | 1 | 3147 | + | 1.B.14.6.1 |
| TC | CP016359 | GRFL_2156 | 3160 | 4956 | + | 8.A.46.1.3 |
| pfam | CP016359 | GRFL_2157 | 4985 | 6541 | + | DUF4957 | DUF5123 |
| CAZyme | CP016359 | GRFL_2158 | 6760 | 12222 | + | CE8 |
| CAZyme | CP016359 | GRFL_2159 | 12219 | 14069 | + | PL9_1 |
| pfam | CP016359 | GRFL_2160 | 14198 | 14995 | + | adh_short | Epimerase | KR | adh_short_C2 |
| pfam | CP016359 | GRFL_2161 | 15007 | 16011 | + | FBPase | FBPase_C |
| pfam | CP016359 | GRFL_2162 | 16112 | 16945 | + | KduI |
| pfam | CP016359 | GRFL_2163 | 16947 | 17714 | + | adh_short | Epimerase | KR | adh_short_C2 |
| pfam | CP016359 | GRFL_2164 | 17735 | 19138 | + | UxaC |
| STP | CP016359 | GRFL_2165 | 19138 | 20157 | + | PfkB |
| sulfatase | CP016359 | GRFL_2166 | 20168 | 20842 | + | S1_27 |
| TC | CP016359 | GRFL_2167 | 20880 | 21818 | + | 2.A.56.1.5 |
| TC | CP016359 | GRFL_2168 | 21823 | 22290 | + | 2.A.56.1.5 |
| TC | CP016359 | GRFL_2169 | 22287 | 23576 | + | 2.A.56.1.5 |
| pfam | CP016359 | GRFL_2170 | 23593 | 25056 | + | Mannitol_dh | Mannitol_dh_C |
| pfam | CP016359 | GRFL_2171 | 25069 | 26682 | + | GD_AH_second | GD_AH_C |
| pfam | CP016359 | GRFL_2172 | 26691 | 27869 | + | GFO_IDH_MocA | F420_oxidored | GFO_IDH_MocA_C3 |
| TF | CP016359 | GRFL_2173 | 27871 | 28923 | - | LacI |
| CAZyme | CP016359 | GRFL_2174 | 29253 | 30656 | + | GH28 |
| pfam | CP016359 | GRFL_2175 | 30681 | 31688 | + | DUF4861 |
| CAZyme | CP016359 | GRFL_2176 | 31690 | 32937 | + | GH105 |
| CAZyme | CP016359 | GRFL_2177 | 32950 | 34581 | + | CBM91 | GH43_10 |
| CAZyme | CP016359 | GRFL_2178 | 34584 | 37382 | + | GH28 | PL9_1 |
| CAZyme | CP016359 | GRFL_2179 | 37383 | 38183 | + | CE12 |
| CAZyme | CP016359 | GRFL_2180 | 38186 | 40102 | + | CE8 |
| CAZyme | CP016359 | GRFL_2181 | 40095 | 40895 | + | CE12 |
| CAZyme | CP016359 | GRFL_2182 | 40909 | 41991 | + | PL10_1 |
Gene ID: GRFL_2155
Type: TC
Location: 1 - 3147 (+)
Type: TC
Location: 1 - 3147 (+)
Gene ID: GRFL_2156
Type: TC
Location: 3160 - 4956 (+)
Type: TC
Location: 3160 - 4956 (+)
Gene ID: GRFL_2157
Type: pfam
Location: 4985 - 6541 (+)
Type: pfam
Location: 4985 - 6541 (+)
Gene ID: GRFL_2158
Type: CAZyme
Location: 6760 - 12222 (+)
Type: CAZyme
Location: 6760 - 12222 (+)
Gene ID: GRFL_2159
Type: CAZyme
Location: 12219 - 14069 (+)
Type: CAZyme
Location: 12219 - 14069 (+)
Gene ID: GRFL_2160
Type: pfam
Location: 14198 - 14995 (+)
Type: pfam
Location: 14198 - 14995 (+)
Gene ID: GRFL_2161
Type: pfam
Location: 15007 - 16011 (+)
Type: pfam
Location: 15007 - 16011 (+)
Gene ID: GRFL_2162
Type: pfam
Location: 16112 - 16945 (+)
Type: pfam
Location: 16112 - 16945 (+)
Gene ID: GRFL_2163
Type: pfam
Location: 16947 - 17714 (+)
Type: pfam
Location: 16947 - 17714 (+)
Gene ID: GRFL_2164
Type: pfam
Location: 17735 - 19138 (+)
Type: pfam
Location: 17735 - 19138 (+)
Gene ID: GRFL_2165
Type: STP
Location: 19138 - 20157 (+)
Type: STP
Location: 19138 - 20157 (+)
Gene ID: GRFL_2166
Type: sulfatase
Location: 20168 - 20842 (+)
Type: sulfatase
Location: 20168 - 20842 (+)
Gene ID: GRFL_2167
Type: TC
Location: 20880 - 21818 (+)
Type: TC
Location: 20880 - 21818 (+)
Gene ID: GRFL_2168
Type: TC
Location: 21823 - 22290 (+)
Type: TC
Location: 21823 - 22290 (+)
Gene ID: GRFL_2169
Type: TC
Location: 22287 - 23576 (+)
Type: TC
Location: 22287 - 23576 (+)
Gene ID: GRFL_2170
Type: pfam
Location: 23593 - 25056 (+)
Type: pfam
Location: 23593 - 25056 (+)
Gene ID: GRFL_2171
Type: pfam
Location: 25069 - 26682 (+)
Type: pfam
Location: 25069 - 26682 (+)
Gene ID: GRFL_2172
Type: pfam
Location: 26691 - 27869 (+)
Type: pfam
Location: 26691 - 27869 (+)
Gene ID: GRFL_2173
Type: TF
Location: 27871 - 28923 (-)
Type: TF
Location: 27871 - 28923 (-)
Gene ID: GRFL_2174
Type: CAZyme
Location: 29253 - 30656 (+)
Type: CAZyme
Location: 29253 - 30656 (+)
Gene ID: GRFL_2175
Type: pfam
Location: 30681 - 31688 (+)
Type: pfam
Location: 30681 - 31688 (+)
Gene ID: GRFL_2176
Type: CAZyme
Location: 31690 - 32937 (+)
Type: CAZyme
Location: 31690 - 32937 (+)
Gene ID: GRFL_2177
Type: CAZyme
Location: 32950 - 34581 (+)
Type: CAZyme
Location: 32950 - 34581 (+)
Gene ID: GRFL_2178
Type: CAZyme
Location: 34584 - 37382 (+)
Type: CAZyme
Location: 34584 - 37382 (+)
Gene ID: GRFL_2179
Type: CAZyme
Location: 37383 - 38183 (+)
Type: CAZyme
Location: 37383 - 38183 (+)
Gene ID: GRFL_2180
Type: CAZyme
Location: 38186 - 40102 (+)
Type: CAZyme
Location: 38186 - 40102 (+)
Gene ID: GRFL_2181
Type: CAZyme
Location: 40095 - 40895 (+)
Type: CAZyme
Location: 40095 - 40895 (+)
Gene ID: GRFL_2182
Type: CAZyme
Location: 40909 - 41991 (+)
Type: CAZyme
Location: 40909 - 41991 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Christiangramia
Species
Christiangramia flava
Gene Composition
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