Cluster: PUL0329
🧬 Cluster Details
- Gene Count: 25
- CAZyme Count: 9
- Substrate: xylan
- Genome ID: PUL0329
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CP016359 | GRFL_0317 | 1 | 1551 | - | CBM91 | GH43_10 |
| CAZyme | CP016359 | GRFL_0318 | 1562 | 3307 | - | CBM91 | GH43_12 |
| sulfatase | CP016359 | GRFL_0319 | 3319 | 4431 | - | S1_4 |
| CAZyme | CP016359 | GRFL_0320 | 4759 | 6705 | - | CE20 | CE20 |
| CAZyme | CP016359 | GRFL_0321 | 6702 | 7877 | - | GH43_1 |
| TC | CP016359 | GRFL_0322 | 8109 | 11234 | + | 1.B.14.6.1 |
| pfam | CP016359 | GRFL_0323 | 11244 | 13169 | + | SusD_RagB | SusD-like_3 |
| pfam | CP016359 | GRFL_0324 | 13309 | 15111 | + | Carbam_trans_N | Carbam_trans_C |
| pfam | CP016359 | GRFL_0325 | 15111 | 15260 | + | DUF5989 |
| NULL(UNKNOWN) | CP016359 | GRFL_0326 | 15241 | 15453 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | CP016359 | GRFL_0327 | 15452 | 15619 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | CP016359 | GRFL_0328 | 15622 | 17265 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | CP016359 | GRFL_0329 | 17427 | 17558 | - | NULL(UNKNOWN) |
| TF | CP016359 | GRFL_0330 | 17744 | 18823 | + | LacI |
| pfam | CP016359 | GRFL_0331 | 18963 | 20366 | - | UxaC |
| CAZyme | CP016359 | GRFL_0332 | 20376 | 22583 | - | GH3 |
| CAZyme | CP016359 | GRFL_0333 | 22707 | 24938 | + | GH67 |
| pfam | CP016359 | GRFL_0334 | 24944 | 25687 | + | adh_short | KR | adh_short_C2 | SDR |
| pfam | CP016359 | GRFL_0335 | 25698 | 26858 | + | AP_endonuc_2 | UxuA |
| CAZyme | CP016359 | GRFL_0336 | 26871 | 28019 | + | GH10 |
| CAZyme | CP016359 | GRFL_0337 | 28000 | 30843 | + | GH115 |
| CAZyme | CP016359 | GRFL_0338 | 30860 | 32179 | - | CE15 |
| NULL(UNKNOWN) | CP016359 | GRFL_0339 | 32271 | 33587 | - | NULL(UNKNOWN) |
| pfam | CP016359 | GRFL_0340 | 33596 | 35086 | - | FGGY_N | FGGY_C |
| TC | CP016359 | GRFL_0341 | 35093 | 36712 | - | 2.A.21.3.19 |
Gene ID: GRFL_0317
Type: CAZyme
Location: 1 - 1551 (-)
Type: CAZyme
Location: 1 - 1551 (-)
Gene ID: GRFL_0318
Type: CAZyme
Location: 1562 - 3307 (-)
Type: CAZyme
Location: 1562 - 3307 (-)
Gene ID: GRFL_0319
Type: sulfatase
Location: 3319 - 4431 (-)
Type: sulfatase
Location: 3319 - 4431 (-)
Gene ID: GRFL_0320
Type: CAZyme
Location: 4759 - 6705 (-)
Type: CAZyme
Location: 4759 - 6705 (-)
Gene ID: GRFL_0321
Type: CAZyme
Location: 6702 - 7877 (-)
Type: CAZyme
Location: 6702 - 7877 (-)
Gene ID: GRFL_0322
Type: TC
Location: 8109 - 11234 (+)
Type: TC
Location: 8109 - 11234 (+)
Gene ID: GRFL_0323
Type: pfam
Location: 11244 - 13169 (+)
Type: pfam
Location: 11244 - 13169 (+)
Gene ID: GRFL_0324
Type: pfam
Location: 13309 - 15111 (+)
Type: pfam
Location: 13309 - 15111 (+)
Gene ID: GRFL_0325
Type: pfam
Location: 15111 - 15260 (+)
Type: pfam
Location: 15111 - 15260 (+)
Gene ID: GRFL_0326
Type: null
Location: 15241 - 15453 (-)
Type: null
Location: 15241 - 15453 (-)
Gene ID: GRFL_0327
Type: null
Location: 15452 - 15619 (+)
Type: null
Location: 15452 - 15619 (+)
Gene ID: GRFL_0328
Type: null
Location: 15622 - 17265 (-)
Type: null
Location: 15622 - 17265 (-)
Gene ID: GRFL_0329
Type: null
Location: 17427 - 17558 (-)
Type: null
Location: 17427 - 17558 (-)
Gene ID: GRFL_0330
Type: TF
Location: 17744 - 18823 (+)
Type: TF
Location: 17744 - 18823 (+)
Gene ID: GRFL_0331
Type: pfam
Location: 18963 - 20366 (-)
Type: pfam
Location: 18963 - 20366 (-)
Gene ID: GRFL_0332
Type: CAZyme
Location: 20376 - 22583 (-)
Type: CAZyme
Location: 20376 - 22583 (-)
Gene ID: GRFL_0333
Type: CAZyme
Location: 22707 - 24938 (+)
Type: CAZyme
Location: 22707 - 24938 (+)
Gene ID: GRFL_0334
Type: pfam
Location: 24944 - 25687 (+)
Type: pfam
Location: 24944 - 25687 (+)
Gene ID: GRFL_0335
Type: pfam
Location: 25698 - 26858 (+)
Type: pfam
Location: 25698 - 26858 (+)
Gene ID: GRFL_0336
Type: CAZyme
Location: 26871 - 28019 (+)
Type: CAZyme
Location: 26871 - 28019 (+)
Gene ID: GRFL_0337
Type: CAZyme
Location: 28000 - 30843 (+)
Type: CAZyme
Location: 28000 - 30843 (+)
Gene ID: GRFL_0338
Type: CAZyme
Location: 30860 - 32179 (-)
Type: CAZyme
Location: 30860 - 32179 (-)
Gene ID: GRFL_0339
Type: null
Location: 32271 - 33587 (-)
Type: null
Location: 32271 - 33587 (-)
Gene ID: GRFL_0340
Type: pfam
Location: 33596 - 35086 (-)
Type: pfam
Location: 33596 - 35086 (-)
Gene ID: GRFL_0341
Type: TC
Location: 35093 - 36712 (-)
Type: TC
Location: 35093 - 36712 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Christiangramia
Species
Christiangramia flava
Gene Composition
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