Cluster: PUL0325_Rep_490_C8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: beta-glucan
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| STP | PUL0325_Rep_490_C8 | Rep_490_c_2_1970 | 2558541 | 2560184 | + | HTH_7 |
| TC | PUL0325_Rep_490_C8 | Rep_490_c_2_1971 | 2560394 | 2563399 | + | 1.B.14.6.1 |
| pfam | PUL0325_Rep_490_C8 | Rep_490_c_2_1972 | 2563399 | 2564934 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0325_Rep_490_C8 | Rep_490_c_2_1973 | 2565002 | 2566483 | + | GH30_3 |
| pfam | PUL0325_Rep_490_C8 | Rep_490_c_2_1974 | 2566506 | 2568509 | + | DUF5016 | DUF5125 | DUF5125 | DUF5121 | DUF5121 |
| CAZyme | PUL0325_Rep_490_C8 | Rep_490_c_2_1975 | 2568527 | 2570821 | + | GH3 |
Gene ID: Rep_490_c_2_1970
Type: STP
Location: 2558541 - 2560184 (+)
Type: STP
Location: 2558541 - 2560184 (+)
Gene ID: Rep_490_c_2_1971
Type: TC
Location: 2560394 - 2563399 (+)
Type: TC
Location: 2560394 - 2563399 (+)
Gene ID: Rep_490_c_2_1972
Type: pfam
Location: 2563399 - 2564934 (+)
Type: pfam
Location: 2563399 - 2564934 (+)
Gene ID: Rep_490_c_2_1973
Type: CAZyme
Location: 2565002 - 2566483 (+)
Type: CAZyme
Location: 2565002 - 2566483 (+)
Gene ID: Rep_490_c_2_1974
Type: pfam
Location: 2566506 - 2568509 (+)
Type: pfam
Location: 2566506 - 2568509 (+)
Gene ID: Rep_490_c_2_1975
Type: CAZyme
Location: 2568527 - 2570821 (+)
Type: CAZyme
Location: 2568527 - 2570821 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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