Cluster: PUL0306_HRGMv2_0156_C3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_00031
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0306_HRGMv2_0156_C3 | HRGMv2_0156_1_1650 | 1948621 | 1952145 | + | HTH_AraC | HTH_AraC |
| CAZyme | PUL0306_HRGMv2_0156_C3 | HRGMv2_0156_1_1651 | 1952261 | 1954870 | + | GH147 |
| TC | PUL0306_HRGMv2_0156_C3 | HRGMv2_0156_1_1652 | 1955094 | 1958069 | + | 1.B.14.6.1 |
| TC | PUL0306_HRGMv2_0156_C3 | HRGMv2_0156_1_1653 | 1958088 | 1959668 | + | 8.A.46.1.1 |
| pfam | PUL0306_HRGMv2_0156_C3 | HRGMv2_0156_1_1654 | 1959692 | 1961446 | + | SusE | DUF5111 | DUF5114 |
| CAZyme | PUL0306_HRGMv2_0156_C3 | HRGMv2_0156_1_1655 | 1961492 | 1962577 | + | GH53 |
| CAZyme | PUL0306_HRGMv2_0156_C3 | HRGMv2_0156_1_1656 | 1962649 | 1965090 | + | GH2 |
Gene ID: HRGMv2_0156_1_1650
Type: TF
Location: 1948621 - 1952145 (+)
Type: TF
Location: 1948621 - 1952145 (+)
Gene ID: HRGMv2_0156_1_1651
Type: CAZyme
Location: 1952261 - 1954870 (+)
Type: CAZyme
Location: 1952261 - 1954870 (+)
Gene ID: HRGMv2_0156_1_1652
Type: TC
Location: 1955094 - 1958069 (+)
Type: TC
Location: 1955094 - 1958069 (+)
Gene ID: HRGMv2_0156_1_1653
Type: TC
Location: 1958088 - 1959668 (+)
Type: TC
Location: 1958088 - 1959668 (+)
Gene ID: HRGMv2_0156_1_1654
Type: pfam
Location: 1959692 - 1961446 (+)
Type: pfam
Location: 1959692 - 1961446 (+)
Gene ID: HRGMv2_0156_1_1655
Type: CAZyme
Location: 1961492 - 1962577 (+)
Type: CAZyme
Location: 1961492 - 1962577 (+)
Gene ID: HRGMv2_0156_1_1656
Type: CAZyme
Location: 1962649 - 1965090 (+)
Type: CAZyme
Location: 1962649 - 1965090 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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