Cluster: PUL0305
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate: pectin
- Genome ID: PUL0305
- CGC Family ID: CGCFAM_00136
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | AE015928 | BT_4108 | 1 | 1200 | + | GH105 |
| CAZyme | AE015928 | BT_4109 | 1210 | 2178 | + | CE8 |
| CAZyme | AE015928 | BT_4110 | 2421 | 4031 | + | CE12 | CE8 |
| TF | AE015928 | BT_4111 | 4097 | 8632 | + | HTH_AraC |
| pfam | AE015928 | BT_4112 | 9561 | 11144 | - | fn3 | DUF4957 | DUF5123 |
| pfam | AE015928 | BT_4113 | 11169 | 13028 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | AE015928 | BT_4114 | 13041 | 16256 | - | 1.B.14.6.1 |
| CAZyme | AE015928 | BT_4115 | 16476 | 17969 | - | PL1_2 |
| CAZyme | AE015928 | BT_4116 | 17976 | 19547 | - | PL1_2 |
| TC | AE015928 | BT_4117 | 19831 | 20625 | + | 9.B.116.3.2 |
| TF | AE015928 | BT_4118 | 20629 | 21441 | + | LytTR |
| CAZyme | AE015928 | BT_4119 | 21892 | 23571 | + | PL1_2 |
| NULL(UNKNOWN) | AE015928 | BT_4120 | 23601 | 25268 | + | NULL(UNKNOWN) |
| TC | AE015928 | BT_4121 | 25295 | 28723 | + | 1.B.14.6.1 |
| pfam | AE015928 | BT_4122 | 28738 | 30813 | + | SusD_RagB | SusD-like_3 |
| CAZyme | AE015928 | BT_4123 | 31104 | 32690 | + | GH28 |
| TF | AE015928 | BT_4124 | 32923 | 37275 | - | HTH_AraC | HTH_AraC |
Gene ID: BT_4108
Type: CAZyme
Location: 1 - 1200 (+)
Type: CAZyme
Location: 1 - 1200 (+)
Gene ID: BT_4109
Type: CAZyme
Location: 1210 - 2178 (+)
Type: CAZyme
Location: 1210 - 2178 (+)
Gene ID: BT_4110
Type: CAZyme
Location: 2421 - 4031 (+)
Type: CAZyme
Location: 2421 - 4031 (+)
Gene ID: BT_4111
Type: TF
Location: 4097 - 8632 (+)
Type: TF
Location: 4097 - 8632 (+)
Gene ID: BT_4112
Type: pfam
Location: 9561 - 11144 (-)
Type: pfam
Location: 9561 - 11144 (-)
Gene ID: BT_4113
Type: pfam
Location: 11169 - 13028 (-)
Type: pfam
Location: 11169 - 13028 (-)
Gene ID: BT_4114
Type: TC
Location: 13041 - 16256 (-)
Type: TC
Location: 13041 - 16256 (-)
Gene ID: BT_4115
Type: CAZyme
Location: 16476 - 17969 (-)
Type: CAZyme
Location: 16476 - 17969 (-)
Gene ID: BT_4116
Type: CAZyme
Location: 17976 - 19547 (-)
Type: CAZyme
Location: 17976 - 19547 (-)
Gene ID: BT_4117
Type: TC
Location: 19831 - 20625 (+)
Type: TC
Location: 19831 - 20625 (+)
Gene ID: BT_4118
Type: TF
Location: 20629 - 21441 (+)
Type: TF
Location: 20629 - 21441 (+)
Gene ID: BT_4119
Type: CAZyme
Location: 21892 - 23571 (+)
Type: CAZyme
Location: 21892 - 23571 (+)
Gene ID: BT_4120
Type: null
Location: 23601 - 25268 (+)
Type: null
Location: 23601 - 25268 (+)
Gene ID: BT_4121
Type: TC
Location: 25295 - 28723 (+)
Type: TC
Location: 25295 - 28723 (+)
Gene ID: BT_4122
Type: pfam
Location: 28738 - 30813 (+)
Type: pfam
Location: 28738 - 30813 (+)
Gene ID: BT_4123
Type: CAZyme
Location: 31104 - 32690 (+)
Type: CAZyme
Location: 31104 - 32690 (+)
Gene ID: BT_4124
Type: TF
Location: 32923 - 37275 (-)
Type: TF
Location: 32923 - 37275 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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