Cluster: PUL0300
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate: xylan
- Genome ID: PUL0300
- CGC Family ID: CGCFAM_00936
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | NZ_PJDO01000018 | DPC6321_RS09570 | 1 | 72 | + | Fic |
| NULL(UNKNOWN) | NZ_PJDO01000018 | DPC6321_RS09575 | 1 | 333 | - | NULL(UNKNOWN) |
| TC | NZ_PJDO01000018 | DPC6321_RS09580 | 640 | 1566 | - | 3.A.1.1.36 |
| TC | NZ_PJDO01000018 | DPC6321_RS09585 | 1563 | 2516 | - | 3.A.1.1.36 |
| STP | NZ_PJDO01000018 | DPC6321_RS09590 | 2652 | 3971 | - | SBP_bac_1 |
| CAZyme | NZ_PJDO01000018 | DPC6321_RS09595 | 4389 | 5423 | - | GH43_26 |
| peptidase | NZ_PJDO01000018 | DPC6321_RS09600 | 5688 | 6632 | + | S09.UPC |
| TF | NZ_PJDO01000018 | DPC6321_RS09605 | 6744 | 7802 | - | LacI |
| CAZyme | NZ_PJDO01000018 | DPC6321_RS09610 | 7918 | 10050 | - | GH43_27 |
| CAZyme | NZ_PJDO01000018 | DPC6321_RS09615 | 10166 | 11761 | + | GH43_4 |
| CAZyme | NZ_PJDO01000018 | DPC6321_RS09620 | 11918 | 13663 | + | GH43_4 |
| NULL(UNKNOWN) | NZ_PJDO01000018 | DPC6321_RS09625 | 13817 | 14029 | - | NULL(UNKNOWN) |
| CAZyme | NZ_PJDO01000018 | DPC6321_RS09630 | 14013 | 16484 | - | GH51_2 |
| TC | NZ_PJDO01000018 | DPC6321_RS09635 | 16741 | 18549 | - | 3.A.1.106.3 |
Gene ID: DPC6321_RS09570
Type: pfam
Location: 1 - 72 (+)
Type: pfam
Location: 1 - 72 (+)
Gene ID: DPC6321_RS09575
Type: null
Location: 1 - 333 (-)
Type: null
Location: 1 - 333 (-)
Gene ID: DPC6321_RS09580
Type: TC
Location: 640 - 1566 (-)
Type: TC
Location: 640 - 1566 (-)
Gene ID: DPC6321_RS09585
Type: TC
Location: 1563 - 2516 (-)
Type: TC
Location: 1563 - 2516 (-)
Gene ID: DPC6321_RS09590
Type: STP
Location: 2652 - 3971 (-)
Type: STP
Location: 2652 - 3971 (-)
Gene ID: DPC6321_RS09595
Type: CAZyme
Location: 4389 - 5423 (-)
Type: CAZyme
Location: 4389 - 5423 (-)
Gene ID: DPC6321_RS09600
Type: peptidase
Location: 5688 - 6632 (+)
Type: peptidase
Location: 5688 - 6632 (+)
Gene ID: DPC6321_RS09605
Type: TF
Location: 6744 - 7802 (-)
Type: TF
Location: 6744 - 7802 (-)
Gene ID: DPC6321_RS09610
Type: CAZyme
Location: 7918 - 10050 (-)
Type: CAZyme
Location: 7918 - 10050 (-)
Gene ID: DPC6321_RS09615
Type: CAZyme
Location: 10166 - 11761 (+)
Type: CAZyme
Location: 10166 - 11761 (+)
Gene ID: DPC6321_RS09620
Type: CAZyme
Location: 11918 - 13663 (+)
Type: CAZyme
Location: 11918 - 13663 (+)
Gene ID: DPC6321_RS09625
Type: null
Location: 13817 - 14029 (-)
Type: null
Location: 13817 - 14029 (-)
Gene ID: DPC6321_RS09630
Type: CAZyme
Location: 14013 - 16484 (-)
Type: CAZyme
Location: 14013 - 16484 (-)
Gene ID: DPC6321_RS09635
Type: TC
Location: 16741 - 18549 (-)
Type: TC
Location: 16741 - 18549 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Composition
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