Cluster: PUL0297
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: PUL0297
- CGC Family ID: CGCFAM_04158
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| STP | NZ_PJEG01000006 | APC1461_RS02130 | 1 | 1350 | + | SBP_bac_1 |
| TC | NZ_PJEG01000006 | APC1461_RS02135 | 1569 | 2531 | + | 3.A.1.1.48 |
| TC | NZ_PJEG01000006 | APC1461_RS02140 | 2534 | 3541 | + | 3.A.1.1.48 |
| CAZyme | NZ_PJEG01000006 | APC1461_RS02145 | 3728 | 5860 | + | GH42 |
| TF | NZ_PJEG01000006 | APC1461_RS02150 | 5904 | 6959 | + | LacI |
| CAZyme | NZ_PJEG01000006 | APC1461_RS02155 | 7155 | 9848 | + | CBM61 | GH53 |
| NULL(UNKNOWN) | NZ_PJEG01000006 | APC1461_RS02160 | 10026 | 10415 | - | NULL(UNKNOWN) |
| pfam | NZ_PJEG01000006 | APC1461_RS02165 | 10484 | 11353 | + | Aldo_ket_red |
| pfam | NZ_PJEG01000006 | APC1461_RS02170 | 11417 | 12100 | + | GmrSD_C |
Gene ID: APC1461_RS02130
Type: STP
Location: 1 - 1350 (+)
Type: STP
Location: 1 - 1350 (+)
Gene ID: APC1461_RS02135
Type: TC
Location: 1569 - 2531 (+)
Type: TC
Location: 1569 - 2531 (+)
Gene ID: APC1461_RS02140
Type: TC
Location: 2534 - 3541 (+)
Type: TC
Location: 2534 - 3541 (+)
Gene ID: APC1461_RS02145
Type: CAZyme
Location: 3728 - 5860 (+)
Type: CAZyme
Location: 3728 - 5860 (+)
Gene ID: APC1461_RS02150
Type: TF
Location: 5904 - 6959 (+)
Type: TF
Location: 5904 - 6959 (+)
Gene ID: APC1461_RS02155
Type: CAZyme
Location: 7155 - 9848 (+)
Type: CAZyme
Location: 7155 - 9848 (+)
Gene ID: APC1461_RS02160
Type: null
Location: 10026 - 10415 (-)
Type: null
Location: 10026 - 10415 (-)
Gene ID: APC1461_RS02165
Type: pfam
Location: 10484 - 11353 (+)
Type: pfam
Location: 10484 - 11353 (+)
Gene ID: APC1461_RS02170
Type: pfam
Location: 11417 - 12100 (+)
Type: pfam
Location: 11417 - 12100 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Composition
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