Cluster: PUL0295
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate: arabinogalactan
- Genome ID: PUL0295
- CGC Family ID: CGCFAM_04142
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NZ_PJEF01000016 | APC1462_RS10100 | 1 | 1482 | + | 2.A.3.1.3 |
| NULL(UNKNOWN) | NZ_PJEF01000016 | APC1462_RS10105 | 1488 | 1730 | - | NULL(UNKNOWN) |
| pfam | NZ_PJEF01000016 | APC1462_RS10110 | 1747 | 2946 | + | DEDD_Tnp_IS110 | Transposase_20 |
| CAZyme | NZ_PJEF01000016 | APC1462_RS10115 | 3127 | 8121 | - | GH43_22 | GH43_34 |
| CAZyme | NZ_PJEF01000016 | APC1462_RS10120 | 8248 | 14250 | - | GH43_22 | GH43_26 |
| CAZyme | NZ_PJEF01000016 | APC1462_RS10125 | 15138 | 18878 | - | GH43_27 |
| CAZyme | NZ_PJEF01000016 | APC1462_RS10130 | 19122 | 22415 | - | GH43_22 |
| CAZyme | NZ_PJEF01000016 | APC1462_RS10135 | 22762 | 25959 | - | GH43_22 |
| TC | NZ_PJEF01000016 | APC1462_RS10145 | 26294 | 26899 | - | 9.B.28.1.3 |
Gene ID: APC1462_RS10100
Type: TC
Location: 1 - 1482 (+)
Type: TC
Location: 1 - 1482 (+)
Gene ID: APC1462_RS10105
Type: null
Location: 1488 - 1730 (-)
Type: null
Location: 1488 - 1730 (-)
Gene ID: APC1462_RS10110
Type: pfam
Location: 1747 - 2946 (+)
Type: pfam
Location: 1747 - 2946 (+)
Gene ID: APC1462_RS10115
Type: CAZyme
Location: 3127 - 8121 (-)
Type: CAZyme
Location: 3127 - 8121 (-)
Gene ID: APC1462_RS10120
Type: CAZyme
Location: 8248 - 14250 (-)
Type: CAZyme
Location: 8248 - 14250 (-)
Gene ID: APC1462_RS10125
Type: CAZyme
Location: 15138 - 18878 (-)
Type: CAZyme
Location: 15138 - 18878 (-)
Gene ID: APC1462_RS10130
Type: CAZyme
Location: 19122 - 22415 (-)
Type: CAZyme
Location: 19122 - 22415 (-)
Gene ID: APC1462_RS10135
Type: CAZyme
Location: 22762 - 25959 (-)
Type: CAZyme
Location: 22762 - 25959 (-)
Gene ID: APC1462_RS10145
Type: TC
Location: 26294 - 26899 (-)
Type: TC
Location: 26294 - 26899 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Composition
Loading chart...
← Back to Cluster List