Cluster: PUL0291_Rep_960_C2
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0291_Rep_960_C2 | Rep_960_c_48_16 | 18468 | 19160 | - | 1.B.35.2.2 |
| TC | PUL0291_Rep_960_C2 | Rep_960_c_48_17 | 19228 | 20649 | - | 2.A.2.3.9 |
| TC | PUL0291_Rep_960_C2 | Rep_960_c_48_18 | 20694 | 22076 | - | 2.A.2.3.9 |
| CAZyme | PUL0291_Rep_960_C2 | Rep_960_c_48_19 | 22122 | 24158 | - | GH31_13 |
| pfam | PUL0291_Rep_960_C2 | Rep_960_c_48_21 | 25069 | 26310 | - | GlcNAc_2-epim |
| pfam | PUL0291_Rep_960_C2 | Rep_960_c_48_22 | 26326 | 27204 | - | DeoC |
| pfam | PUL0291_Rep_960_C2 | Rep_960_c_48_23 | 27225 | 28115 | - | NAD_binding_2 | F420_oxidored | NAD_binding_11 |
| STP | PUL0291_Rep_960_C2 | Rep_960_c_48_24 | 28282 | 29178 | + | PfkB |
| TF | PUL0291_Rep_960_C2 | Rep_960_c_48_25 | 29211 | 30014 | + | HTH_DeoR |
Gene ID: Rep_960_c_48_16
Type: TC
Location: 18468 - 19160 (-)
Type: TC
Location: 18468 - 19160 (-)
Gene ID: Rep_960_c_48_17
Type: TC
Location: 19228 - 20649 (-)
Type: TC
Location: 19228 - 20649 (-)
Gene ID: Rep_960_c_48_18
Type: TC
Location: 20694 - 22076 (-)
Type: TC
Location: 20694 - 22076 (-)
Gene ID: Rep_960_c_48_19
Type: CAZyme
Location: 22122 - 24158 (-)
Type: CAZyme
Location: 22122 - 24158 (-)
Gene ID: Rep_960_c_48_21
Type: pfam
Location: 25069 - 26310 (-)
Type: pfam
Location: 25069 - 26310 (-)
Gene ID: Rep_960_c_48_22
Type: pfam
Location: 26326 - 27204 (-)
Type: pfam
Location: 26326 - 27204 (-)
Gene ID: Rep_960_c_48_23
Type: pfam
Location: 27225 - 28115 (-)
Type: pfam
Location: 27225 - 28115 (-)
Gene ID: Rep_960_c_48_24
Type: STP
Location: 28282 - 29178 (+)
Type: STP
Location: 28282 - 29178 (+)
Gene ID: Rep_960_c_48_25
Type: TF
Location: 29211 - 30014 (+)
Type: TF
Location: 29211 - 30014 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Composition
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