Cluster: PUL0291_HRGMv2_1783_C3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: HRGMv2_1783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0291_HRGMv2_1783_C3 | HRGMv2_1783_28_16 | 17614 | 18306 | - | 1.B.35.2.2 |
| TC | PUL0291_HRGMv2_1783_C3 | HRGMv2_1783_28_17 | 18386 | 19777 | - | 2.A.2.3.9 |
| TC | PUL0291_HRGMv2_1783_C3 | HRGMv2_1783_28_18 | 19821 | 21203 | - | 2.A.2.3.9 |
| CAZyme | PUL0291_HRGMv2_1783_C3 | HRGMv2_1783_28_19 | 21249 | 23285 | - | GH31_13 |
| pfam | PUL0291_HRGMv2_1783_C3 | HRGMv2_1783_28_21 | 24232 | 25473 | - | GlcNAc_2-epim |
| pfam | PUL0291_HRGMv2_1783_C3 | HRGMv2_1783_28_22 | 25489 | 26367 | - | DeoC |
| pfam | PUL0291_HRGMv2_1783_C3 | HRGMv2_1783_28_23 | 26387 | 27277 | - | NAD_binding_2 | F420_oxidored | NAD_binding_11 |
| STP | PUL0291_HRGMv2_1783_C3 | HRGMv2_1783_28_24 | 27443 | 28339 | + | PfkB |
| TF | PUL0291_HRGMv2_1783_C3 | HRGMv2_1783_28_25 | 28373 | 29158 | + | HTH_DeoR |
Gene ID: HRGMv2_1783_28_16
Type: TC
Location: 17614 - 18306 (-)
Type: TC
Location: 17614 - 18306 (-)
Gene ID: HRGMv2_1783_28_17
Type: TC
Location: 18386 - 19777 (-)
Type: TC
Location: 18386 - 19777 (-)
Gene ID: HRGMv2_1783_28_18
Type: TC
Location: 19821 - 21203 (-)
Type: TC
Location: 19821 - 21203 (-)
Gene ID: HRGMv2_1783_28_19
Type: CAZyme
Location: 21249 - 23285 (-)
Type: CAZyme
Location: 21249 - 23285 (-)
Gene ID: HRGMv2_1783_28_21
Type: pfam
Location: 24232 - 25473 (-)
Type: pfam
Location: 24232 - 25473 (-)
Gene ID: HRGMv2_1783_28_22
Type: pfam
Location: 25489 - 26367 (-)
Type: pfam
Location: 25489 - 26367 (-)
Gene ID: HRGMv2_1783_28_23
Type: pfam
Location: 26387 - 27277 (-)
Type: pfam
Location: 26387 - 27277 (-)
Gene ID: HRGMv2_1783_28_24
Type: STP
Location: 27443 - 28339 (+)
Type: STP
Location: 27443 - 28339 (+)
Gene ID: HRGMv2_1783_28_25
Type: TF
Location: 28373 - 29158 (+)
Type: TF
Location: 28373 - 29158 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella michiganensis
Gene Composition
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