Cluster: PUL0285_Rep_847_C0
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: Rep_847
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0285_Rep_847_C0 | Rep_847_c_0_486 | 553100 | 554446 | - | 3.A.1.1.34 |
| CAZyme | PUL0285_Rep_847_C0 | Rep_847_c_0_487 | 554702 | 556777 | - | GH42 |
| TC | PUL0285_Rep_847_C0 | Rep_847_c_0_488 | 556957 | 557955 | - | 3.A.1.1.48 |
| TC | PUL0285_Rep_847_C0 | Rep_847_c_0_489 | 558008 | 558934 | - | 3.A.1.1.48 |
| TF | PUL0285_Rep_847_C0 | Rep_847_c_0_490 | 559150 | 560160 | + | LacI |
| pfam | PUL0285_Rep_847_C0 | Rep_847_c_0_491 | 560153 | 560887 | - | PseudoU_synth_2 |
Gene ID: Rep_847_c_0_486
Type: TC
Location: 553100 - 554446 (-)
Type: TC
Location: 553100 - 554446 (-)
Gene ID: Rep_847_c_0_487
Type: CAZyme
Location: 554702 - 556777 (-)
Type: CAZyme
Location: 554702 - 556777 (-)
Gene ID: Rep_847_c_0_488
Type: TC
Location: 556957 - 557955 (-)
Type: TC
Location: 556957 - 557955 (-)
Gene ID: Rep_847_c_0_489
Type: TC
Location: 558008 - 558934 (-)
Type: TC
Location: 558008 - 558934 (-)
Gene ID: Rep_847_c_0_490
Type: TF
Location: 559150 - 560160 (+)
Type: TF
Location: 559150 - 560160 (+)
Gene ID: Rep_847_c_0_491
Type: pfam
Location: 560153 - 560887 (-)
Type: pfam
Location: 560153 - 560887 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium breve
Gene Composition
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