Cluster: PUL0275_A72.CMAG_1_C0
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: A72.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0275_A72.CMAG_1_C0 | A72_contig_1503_1557 | 1927664 | 1929268 | + | GH13_44 |
| CAZyme | PUL0275_A72.CMAG_1_C0 | A72_contig_1503_1558 | 1929714 | 1931912 | + | GH77 |
| TC | PUL0275_A72.CMAG_1_C0 | A72_contig_1503_1559 | 1932384 | 1932986 | - | 9.B.28.1.3 |
| TC | PUL0275_A72.CMAG_1_C0 | A72_contig_1503_1560 | 1933305 | 1934141 | - | 3.A.1.1.45 |
| TC | PUL0275_A72.CMAG_1_C0 | A72_contig_1503_1561 | 1934141 | 1934995 | - | 3.A.1.1.45 |
| TF | PUL0275_A72.CMAG_1_C0 | A72_contig_1503_1562 | 1935458 | 1936468 | + | LacI |
| TC | PUL0275_A72.CMAG_1_C0 | A72_contig_1503_1564 | 1936820 | 1938154 | - | 3.A.1.1.45 |
| CAZyme | PUL0275_A72.CMAG_1_C0 | A72_contig_1503_1565 | 1938513 | 1940288 | + | GH13_30 |
Gene ID: A72_contig_1503_1557
Type: CAZyme
Location: 1927664 - 1929268 (+)
Type: CAZyme
Location: 1927664 - 1929268 (+)
Gene ID: A72_contig_1503_1558
Type: CAZyme
Location: 1929714 - 1931912 (+)
Type: CAZyme
Location: 1929714 - 1931912 (+)
Gene ID: A72_contig_1503_1559
Type: TC
Location: 1932384 - 1932986 (-)
Type: TC
Location: 1932384 - 1932986 (-)
Gene ID: A72_contig_1503_1560
Type: TC
Location: 1933305 - 1934141 (-)
Type: TC
Location: 1933305 - 1934141 (-)
Gene ID: A72_contig_1503_1561
Type: TC
Location: 1934141 - 1934995 (-)
Type: TC
Location: 1934141 - 1934995 (-)
Gene ID: A72_contig_1503_1562
Type: TF
Location: 1935458 - 1936468 (+)
Type: TF
Location: 1935458 - 1936468 (+)
Gene ID: A72_contig_1503_1564
Type: TC
Location: 1936820 - 1938154 (-)
Type: TC
Location: 1936820 - 1938154 (-)
Gene ID: A72_contig_1503_1565
Type: CAZyme
Location: 1938513 - 1940288 (+)
Type: CAZyme
Location: 1938513 - 1940288 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium animalis
Gene Composition
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