Cluster: PUL0269
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate: chitin
- Genome ID: PUL0269
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NC_017943 | HFX_RS15565 | 1 | 1131 | - | 3.A.1.1.16 |
| pfam | NC_017943 | HFX_RS15570 | 1301 | 2527 | + | Aminotran_5 | DegT_DnrJ_EryC1 | SelA |
| CAZyme | NC_017943 | HFX_RS15575 | 2577 | 3284 | + | CE14 |
| pfam | NC_017943 | HFX_RS15580 | 3331 | 3705 | + | Ribonuc_L-PSP |
| CAZyme | NC_017943 | HFX_RS15585 | 3803 | 5395 | - | GH3 |
| TC | NC_017943 | HFX_RS15590 | 5492 | 6403 | - | 3.A.1.1.41 |
| TC | NC_017943 | HFX_RS15595 | 6405 | 7382 | - | 3.A.1.1.7 |
| STP | NC_017943 | HFX_RS15600 | 7534 | 8850 | - | SBP_bac_1 |
| pfam | NC_017943 | HFX_RS15605 | 9002 | 10153 | + | MR_MLE_N | MR_MLE_C |
| TF | NC_017943 | HFX_RS15610 | 10220 | 10963 | + | HTH_5 |
| pfam | NC_017943 | HFX_RS15615 | 10982 | 12052 | - | ADH_N | Glu_dehyd_C |
| NULL(UNKNOWN) | NC_017943 | HFX_RS19805 | 12032 | 12235 | + | NULL(UNKNOWN) |
| CAZyme | NC_017943 | HFX_RS15620 | 12379 | 13797 | - | CBM5 | GH18 |
| CAZyme | NC_017943 | HFX_RS15625 | 13852 | 15294 | - | CBM5 |
| CAZyme | NC_017943 | HFX_RS15630 | 15291 | 17003 | - | CBM5 | GH18 |
| CAZyme | NC_017943 | HFX_RS15635 | 17302 | 18924 | - | CBM5 | GH18 |
Gene ID: HFX_RS15565
Type: TC
Location: 1 - 1131 (-)
Type: TC
Location: 1 - 1131 (-)
Gene ID: HFX_RS15570
Type: pfam
Location: 1301 - 2527 (+)
Type: pfam
Location: 1301 - 2527 (+)
Gene ID: HFX_RS15575
Type: CAZyme
Location: 2577 - 3284 (+)
Type: CAZyme
Location: 2577 - 3284 (+)
Gene ID: HFX_RS15580
Type: pfam
Location: 3331 - 3705 (+)
Type: pfam
Location: 3331 - 3705 (+)
Gene ID: HFX_RS15585
Type: CAZyme
Location: 3803 - 5395 (-)
Type: CAZyme
Location: 3803 - 5395 (-)
Gene ID: HFX_RS15590
Type: TC
Location: 5492 - 6403 (-)
Type: TC
Location: 5492 - 6403 (-)
Gene ID: HFX_RS15595
Type: TC
Location: 6405 - 7382 (-)
Type: TC
Location: 6405 - 7382 (-)
Gene ID: HFX_RS15600
Type: STP
Location: 7534 - 8850 (-)
Type: STP
Location: 7534 - 8850 (-)
Gene ID: HFX_RS15605
Type: pfam
Location: 9002 - 10153 (+)
Type: pfam
Location: 9002 - 10153 (+)
Gene ID: HFX_RS15610
Type: TF
Location: 10220 - 10963 (+)
Type: TF
Location: 10220 - 10963 (+)
Gene ID: HFX_RS15615
Type: pfam
Location: 10982 - 12052 (-)
Type: pfam
Location: 10982 - 12052 (-)
Gene ID: HFX_RS19805
Type: null
Location: 12032 - 12235 (+)
Type: null
Location: 12032 - 12235 (+)
Gene ID: HFX_RS15620
Type: CAZyme
Location: 12379 - 13797 (-)
Type: CAZyme
Location: 12379 - 13797 (-)
Gene ID: HFX_RS15625
Type: CAZyme
Location: 13852 - 15294 (-)
Type: CAZyme
Location: 13852 - 15294 (-)
Gene ID: HFX_RS15630
Type: CAZyme
Location: 15291 - 17003 (-)
Type: CAZyme
Location: 15291 - 17003 (-)
Gene ID: HFX_RS15635
Type: CAZyme
Location: 17302 - 18924 (-)
Type: CAZyme
Location: 17302 - 18924 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Haloferax
Species
Haloferax mediterranei
Gene Composition
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