Cluster: PUL0267_Rep_1027_C1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: Rep_1027
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| STP | PUL0267_Rep_1027_C1 | Rep_1027_c_27_4 | 3020 | 3949 | + | Pyr_redox_2 |
| CAZyme | PUL0267_Rep_1027_C1 | Rep_1027_c_27_5 | 4119 | 6017 | + | CBM48 | GH13_9 |
| pfam | PUL0267_Rep_1027_C1 | Rep_1027_c_27_6 | 6034 | 7179 | + | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| pfam | PUL0267_Rep_1027_C1 | Rep_1027_c_27_7 | 7169 | 8311 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | PUL0267_Rep_1027_C1 | Rep_1027_c_27_8 | 8321 | 9751 | + | GT5 |
| CAZyme | PUL0267_Rep_1027_C1 | Rep_1027_c_27_9 | 9756 | 12152 | + | GT35 |
| CAZyme | PUL0267_Rep_1027_C1 | Rep_1027_c_27_10 | 12152 | 13921 | + | GH13_39 |
| pfam | PUL0267_Rep_1027_C1 | Rep_1027_c_27_11 | 14034 | 15758 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| pfam | PUL0267_Rep_1027_C1 | Rep_1027_c_27_12 | 15860 | 17908 | + | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| pfam | PUL0267_Rep_1027_C1 | Rep_1027_c_27_13 | 17898 | 20738 | + | UvrA_DNA-bind | UvrA_inter |
Gene ID: Rep_1027_c_27_4
Type: STP
Location: 3020 - 3949 (+)
Type: STP
Location: 3020 - 3949 (+)
Gene ID: Rep_1027_c_27_5
Type: CAZyme
Location: 4119 - 6017 (+)
Type: CAZyme
Location: 4119 - 6017 (+)
Gene ID: Rep_1027_c_27_6
Type: pfam
Location: 6034 - 7179 (+)
Type: pfam
Location: 6034 - 7179 (+)
Gene ID: Rep_1027_c_27_7
Type: pfam
Location: 7169 - 8311 (+)
Type: pfam
Location: 7169 - 8311 (+)
Gene ID: Rep_1027_c_27_8
Type: CAZyme
Location: 8321 - 9751 (+)
Type: CAZyme
Location: 8321 - 9751 (+)
Gene ID: Rep_1027_c_27_9
Type: CAZyme
Location: 9756 - 12152 (+)
Type: CAZyme
Location: 9756 - 12152 (+)
Gene ID: Rep_1027_c_27_10
Type: CAZyme
Location: 12152 - 13921 (+)
Type: CAZyme
Location: 12152 - 13921 (+)
Gene ID: Rep_1027_c_27_11
Type: pfam
Location: 14034 - 15758 (+)
Type: pfam
Location: 14034 - 15758 (+)
Gene ID: Rep_1027_c_27_12
Type: pfam
Location: 15860 - 17908 (+)
Type: pfam
Location: 15860 - 17908 (+)
Gene ID: Rep_1027_c_27_13
Type: pfam
Location: 17898 - 20738 (+)
Type: pfam
Location: 17898 - 20738 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus sp902491705
Gene Composition
Loading chart...
← Back to Cluster List