Cluster: PUL0232_Rep_847_C1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: Rep_847
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0232_Rep_847_C1 | Rep_847_c_2_4 | 5534 | 6400 | - | 3.A.1.1.28 |
| TC | PUL0232_Rep_847_C1 | Rep_847_c_2_5 | 6419 | 7369 | - | 3.A.1.1.28 |
| STP | PUL0232_Rep_847_C1 | Rep_847_c_2_6 | 7391 | 8680 | - | SBP_bac_1 |
| TF | PUL0232_Rep_847_C1 | Rep_847_c_2_7 | 8854 | 10062 | + | MarR |
| CAZyme | PUL0232_Rep_847_C1 | Rep_847_c_2_8 | 10175 | 12490 | - | GH36 |
| pfam | PUL0232_Rep_847_C1 | Rep_847_c_2_9 | 12607 | 13041 | - | dCMP_cyt_deam_1 | MafB19-deam |
Gene ID: Rep_847_c_2_4
Type: TC
Location: 5534 - 6400 (-)
Type: TC
Location: 5534 - 6400 (-)
Gene ID: Rep_847_c_2_5
Type: TC
Location: 6419 - 7369 (-)
Type: TC
Location: 6419 - 7369 (-)
Gene ID: Rep_847_c_2_6
Type: STP
Location: 7391 - 8680 (-)
Type: STP
Location: 7391 - 8680 (-)
Gene ID: Rep_847_c_2_7
Type: TF
Location: 8854 - 10062 (+)
Type: TF
Location: 8854 - 10062 (+)
Gene ID: Rep_847_c_2_8
Type: CAZyme
Location: 10175 - 12490 (-)
Type: CAZyme
Location: 10175 - 12490 (-)
Gene ID: Rep_847_c_2_9
Type: pfam
Location: 12607 - 13041 (-)
Type: pfam
Location: 12607 - 13041 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium breve
Gene Composition
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