Cluster: PUL0230
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: PUL0230
- CGC Family ID: CGCFAM_00336
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CP000033 | LBA1864 | 1 | 858 | - | 3.A.1.1.27 |
| TC | CP000033 | LBA1865 | 861 | 2219 | - | 3.A.1.1.27 |
| TC | CP000033 | LBA1866 | 2290 | 3516 | - | 3.A.1.1.27 |
| TC | CP000033 | LBA1867 | 3603 | 4709 | - | 3.A.1.1.20 |
| STP | CP000033 | LBA1868 | 4758 | 6140 | + | HTH_12 |
| pfam | CP000033 | LBA1869 | 6198 | 6863 | - | Hydrolase | HAD_2 |
| CAZyme | CP000033 | LBA1870 | 6848 | 9118 | - | GH65 |
| CAZyme | CP000033 | LBA1871 | 9289 | 11010 | - | CBM34 | GH13_20 |
| CAZyme | CP000033 | LBA1872 | 11014 | 12669 | - | GH13_31 |
| pfam | CP000033 | LBA1873 | 12781 | 13956 | - | Acetate_kinase |
| TF | CP000033 | LBA1874 | 14097 | 15047 | - | LacI |
| pfam | CP000033 | LBA1875 | 15056 | 15057 | - | Y_phosphatase3 |
Gene ID: LBA1864
Type: TC
Location: 1 - 858 (-)
Type: TC
Location: 1 - 858 (-)
Gene ID: LBA1865
Type: TC
Location: 861 - 2219 (-)
Type: TC
Location: 861 - 2219 (-)
Gene ID: LBA1866
Type: TC
Location: 2290 - 3516 (-)
Type: TC
Location: 2290 - 3516 (-)
Gene ID: LBA1867
Type: TC
Location: 3603 - 4709 (-)
Type: TC
Location: 3603 - 4709 (-)
Gene ID: LBA1868
Type: STP
Location: 4758 - 6140 (+)
Type: STP
Location: 4758 - 6140 (+)
Gene ID: LBA1869
Type: pfam
Location: 6198 - 6863 (-)
Type: pfam
Location: 6198 - 6863 (-)
Gene ID: LBA1870
Type: CAZyme
Location: 6848 - 9118 (-)
Type: CAZyme
Location: 6848 - 9118 (-)
Gene ID: LBA1871
Type: CAZyme
Location: 9289 - 11010 (-)
Type: CAZyme
Location: 9289 - 11010 (-)
Gene ID: LBA1872
Type: CAZyme
Location: 11014 - 12669 (-)
Type: CAZyme
Location: 11014 - 12669 (-)
Gene ID: LBA1873
Type: pfam
Location: 12781 - 13956 (-)
Type: pfam
Location: 12781 - 13956 (-)
Gene ID: LBA1874
Type: TF
Location: 14097 - 15047 (-)
Type: TF
Location: 14097 - 15047 (-)
Gene ID: LBA1875
Type: pfam
Location: 15056 - 15057 (-)
Type: pfam
Location: 15056 - 15057 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus acidophilus
Gene Composition
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