Cluster: PUL0225
🧬 Cluster Details
- Gene Count: 36
- CAZyme Count: 12
- Substrate: galactan
- Genome ID: PUL0225
- CGC Family ID: CGCFAM_06459
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | NZ_DS990130 | BACPLE_RS08560 | 1 | 1284 | - | HTH_8 |
| CAZyme | NZ_DS990130 | BACPLE_RS08570 | 3772 | 4722 | - | GH16_16 |
| CAZyme | NZ_DS990130 | BACPLE_RS08575 | 4749 | 5957 | - | GH117 | GH117 |
| CAZyme | NZ_DS990130 | BACPLE_RS08580 | 5966 | 8521 | - | GH2 |
| CAZyme | NZ_DS990130 | BACPLE_RS08585 | 8560 | 11115 | - | GH2 |
| pfam | NZ_DS990130 | BACPLE_RS08590 | 11236 | 12723 | - | GD_AH_second | SAF | GD_AH_C |
| pfam | NZ_DS990130 | BACPLE_RS08595 | 12766 | 14208 | - | Mannitol_dh | Mannitol_dh_C |
| sulfatase | NZ_DS990130 | BACPLE_RS08600 | 14238 | 15254 | - | S1_16 |
| TC | NZ_DS990130 | BACPLE_RS08605 | 15292 | 16545 | - | 2.A.1.7.1 |
| pfam | NZ_DS990130 | BACPLE_RS08610 | 16542 | 17465 | - | Amidohydro_2 |
| pfam | NZ_DS990130 | BACPLE_RS08615 | 17477 | 18409 | - | Aldo_ket_red |
| pfam | NZ_DS990130 | BACPLE_RS08620 | 18450 | 18833 | - | rhaM |
| NULL(UNKNOWN) | NZ_DS990130 | BACPLE_RS19300 | 19027 | 19200 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | NZ_DS990130 | BACPLE_RS08625 | 19263 | 19742 | - | NULL(UNKNOWN) |
| CAZyme | NZ_DS990130 | BACPLE_RS08630 | 19855 | 21426 | - | GH50 |
| CAZyme | NZ_DS990130 | BACPLE_RS08635 | 21447 | 23759 | - | GH105 | GH154 |
| NULL(UNKNOWN) | NZ_DS990130 | BACPLE_RS08640 | 23847 | 25577 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | NZ_DS990130 | BACPLE_RS08645 | 25641 | 26153 | - | NULL(UNKNOWN) |
| pfam | NZ_DS990130 | BACPLE_RS08650 | 26391 | 26882 | - | CBM_4_9 |
| CAZyme | NZ_DS990130 | BACPLE_RS08655 | 26929 | 27894 | - | GH16_12 |
| NULL(UNKNOWN) | NZ_DS990130 | BACPLE_RS19305 | 28296 | 28490 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | NZ_DS990130 | BACPLE_RS08660 | 28901 | 30211 | - | NULL(UNKNOWN) |
| CAZyme | NZ_DS990130 | BACPLE_RS08665 | 30217 | 32403 | - | GH86 |
| CAZyme | NZ_DS990130 | BACPLE_RS08670 | 32454 | 34277 | - | GH86 |
| NULL(UNKNOWN) | NZ_DS990130 | BACPLE_RS08675 | 34373 | 34927 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | NZ_DS990130 | BACPLE_RS08680 | 34943 | 36667 | - | NULL(UNKNOWN) |
| pfam | NZ_DS990130 | BACPLE_RS18590 | 36673 | 38709 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_DS990130 | BACPLE_RS08695 | 38729 | 41827 | - | 1.B.14.6.1 |
| TF | NZ_DS990130 | BACPLE_RS08700 | 41960 | 45931 | - | HTH_AraC |
| pfam | NZ_DS990130 | BACPLE_RS08705 | 46196 | 47368 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| sulfatase | NZ_DS990130 | BACPLE_RS08710 | 47393 | 48976 | - | S1_11 |
| CAZyme | NZ_DS990130 | BACPLE_RS08715 | 48981 | 50759 | - | GH29 |
| CAZyme | NZ_DS990130 | BACPLE_RS08720 | 51070 | 51972 | + | GH16_14 |
| pfam | NZ_DS990130 | BACPLE_RS08725 | 52076 | 53707 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_DS990130 | BACPLE_RS08730 | 53719 | 56781 | - | 1.B.14.6.1 |
| CAZyme | NZ_DS990130 | BACPLE_RS08735 | 57020 | 60280 | - | GH2 |
Gene ID: BACPLE_RS08560
Type: TF
Location: 1 - 1284 (-)
Type: TF
Location: 1 - 1284 (-)
Gene ID: BACPLE_RS08570
Type: CAZyme
Location: 3772 - 4722 (-)
Type: CAZyme
Location: 3772 - 4722 (-)
Gene ID: BACPLE_RS08575
Type: CAZyme
Location: 4749 - 5957 (-)
Type: CAZyme
Location: 4749 - 5957 (-)
Gene ID: BACPLE_RS08580
Type: CAZyme
Location: 5966 - 8521 (-)
Type: CAZyme
Location: 5966 - 8521 (-)
Gene ID: BACPLE_RS08585
Type: CAZyme
Location: 8560 - 11115 (-)
Type: CAZyme
Location: 8560 - 11115 (-)
Gene ID: BACPLE_RS08590
Type: pfam
Location: 11236 - 12723 (-)
Type: pfam
Location: 11236 - 12723 (-)
Gene ID: BACPLE_RS08595
Type: pfam
Location: 12766 - 14208 (-)
Type: pfam
Location: 12766 - 14208 (-)
Gene ID: BACPLE_RS08600
Type: sulfatase
Location: 14238 - 15254 (-)
Type: sulfatase
Location: 14238 - 15254 (-)
Gene ID: BACPLE_RS08605
Type: TC
Location: 15292 - 16545 (-)
Type: TC
Location: 15292 - 16545 (-)
Gene ID: BACPLE_RS08610
Type: pfam
Location: 16542 - 17465 (-)
Type: pfam
Location: 16542 - 17465 (-)
Gene ID: BACPLE_RS08615
Type: pfam
Location: 17477 - 18409 (-)
Type: pfam
Location: 17477 - 18409 (-)
Gene ID: BACPLE_RS08620
Type: pfam
Location: 18450 - 18833 (-)
Type: pfam
Location: 18450 - 18833 (-)
Gene ID: BACPLE_RS19300
Type: null
Location: 19027 - 19200 (-)
Type: null
Location: 19027 - 19200 (-)
Gene ID: BACPLE_RS08625
Type: null
Location: 19263 - 19742 (-)
Type: null
Location: 19263 - 19742 (-)
Gene ID: BACPLE_RS08630
Type: CAZyme
Location: 19855 - 21426 (-)
Type: CAZyme
Location: 19855 - 21426 (-)
Gene ID: BACPLE_RS08635
Type: CAZyme
Location: 21447 - 23759 (-)
Type: CAZyme
Location: 21447 - 23759 (-)
Gene ID: BACPLE_RS08640
Type: null
Location: 23847 - 25577 (-)
Type: null
Location: 23847 - 25577 (-)
Gene ID: BACPLE_RS08645
Type: null
Location: 25641 - 26153 (-)
Type: null
Location: 25641 - 26153 (-)
Gene ID: BACPLE_RS08650
Type: pfam
Location: 26391 - 26882 (-)
Type: pfam
Location: 26391 - 26882 (-)
Gene ID: BACPLE_RS08655
Type: CAZyme
Location: 26929 - 27894 (-)
Type: CAZyme
Location: 26929 - 27894 (-)
Gene ID: BACPLE_RS19305
Type: null
Location: 28296 - 28490 (-)
Type: null
Location: 28296 - 28490 (-)
Gene ID: BACPLE_RS08660
Type: null
Location: 28901 - 30211 (-)
Type: null
Location: 28901 - 30211 (-)
Gene ID: BACPLE_RS08665
Type: CAZyme
Location: 30217 - 32403 (-)
Type: CAZyme
Location: 30217 - 32403 (-)
Gene ID: BACPLE_RS08670
Type: CAZyme
Location: 32454 - 34277 (-)
Type: CAZyme
Location: 32454 - 34277 (-)
Gene ID: BACPLE_RS08675
Type: null
Location: 34373 - 34927 (-)
Type: null
Location: 34373 - 34927 (-)
Gene ID: BACPLE_RS08680
Type: null
Location: 34943 - 36667 (-)
Type: null
Location: 34943 - 36667 (-)
Gene ID: BACPLE_RS18590
Type: pfam
Location: 36673 - 38709 (-)
Type: pfam
Location: 36673 - 38709 (-)
Gene ID: BACPLE_RS08695
Type: TC
Location: 38729 - 41827 (-)
Type: TC
Location: 38729 - 41827 (-)
Gene ID: BACPLE_RS08700
Type: TF
Location: 41960 - 45931 (-)
Type: TF
Location: 41960 - 45931 (-)
Gene ID: BACPLE_RS08705
Type: pfam
Location: 46196 - 47368 (-)
Type: pfam
Location: 46196 - 47368 (-)
Gene ID: BACPLE_RS08710
Type: sulfatase
Location: 47393 - 48976 (-)
Type: sulfatase
Location: 47393 - 48976 (-)
Gene ID: BACPLE_RS08715
Type: CAZyme
Location: 48981 - 50759 (-)
Type: CAZyme
Location: 48981 - 50759 (-)
Gene ID: BACPLE_RS08720
Type: CAZyme
Location: 51070 - 51972 (+)
Type: CAZyme
Location: 51070 - 51972 (+)
Gene ID: BACPLE_RS08725
Type: pfam
Location: 52076 - 53707 (-)
Type: pfam
Location: 52076 - 53707 (-)
Gene ID: BACPLE_RS08730
Type: TC
Location: 53719 - 56781 (-)
Type: TC
Location: 53719 - 56781 (-)
Gene ID: BACPLE_RS08735
Type: CAZyme
Location: 57020 - 60280 (-)
Type: CAZyme
Location: 57020 - 60280 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius
Gene Composition
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