Cluster: PUL0199
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 6
- Substrate: alginate
- Genome ID: PUL0199
- CGC Family ID: CGCFAM_00331
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_007912 | SDE_RS17125 | 1 | 1659 | + | CBM16 | CBM32 | PL18 |
| pfam | NC_007912 | SDE_RS17130 | 2028 | 3464 | + | 2OG-FeII_Oxy_3 |
| NULL(UNKNOWN) | NC_007912 | SDE_RS17135 | 3433 | 3642 | + | NULL(UNKNOWN) |
| CAZyme | NC_007912 | SDE_RS17140 | 3769 | 5346 | - | PL6 |
| CAZyme | NC_007912 | SDE_RS17145 | 5465 | 8143 | - | PL6 |
| STP | NC_007912 | SDE_RS17150 | 8249 | 9100 | - | SBP_bac_3 |
| pfam | NC_007912 | SDE_RS17155 | 9534 | 10283 | - | TIM |
| pfam | NC_007912 | SDE_RS17160 | 10308 | 12056 | - | FBPase_2 |
| pfam | NC_007912 | SDE_RS17165 | 12125 | 13222 | - | F_bP_aldolase |
| STP | NC_007912 | SDE_RS17170 | 13436 | 14380 | - | PfkB |
| pfam | NC_007912 | SDE_RS17175 | 14505 | 15257 | - | adh_short | KR | adh_short_C2 | SDR |
| TC | NC_007912 | SDE_RS17180 | 15321 | 16595 | - | 2.A.1.14.25 |
| STP | NC_007912 | SDE_RS17185 | 16607 | 16951 | - | AraC_binding |
| CAZyme | NC_007912 | SDE_RS17190 | 17076 | 19286 | - | PL17 | PL17_2 |
| CAZyme | NC_007912 | SDE_RS17195 | 19303 | 21585 | - | PL6 | PL6_1 |
| CAZyme | NC_007912 | SDE_RS17205 | 22111 | 23142 | + | PL7_5 |
| TF | NC_007912 | SDE_RS17210 | 23297 | 24067 | + | GntR |
Gene ID: SDE_RS17125
Type: CAZyme
Location: 1 - 1659 (+)
Type: CAZyme
Location: 1 - 1659 (+)
Gene ID: SDE_RS17130
Type: pfam
Location: 2028 - 3464 (+)
Type: pfam
Location: 2028 - 3464 (+)
Gene ID: SDE_RS17135
Type: null
Location: 3433 - 3642 (+)
Type: null
Location: 3433 - 3642 (+)
Gene ID: SDE_RS17140
Type: CAZyme
Location: 3769 - 5346 (-)
Type: CAZyme
Location: 3769 - 5346 (-)
Gene ID: SDE_RS17145
Type: CAZyme
Location: 5465 - 8143 (-)
Type: CAZyme
Location: 5465 - 8143 (-)
Gene ID: SDE_RS17150
Type: STP
Location: 8249 - 9100 (-)
Type: STP
Location: 8249 - 9100 (-)
Gene ID: SDE_RS17155
Type: pfam
Location: 9534 - 10283 (-)
Type: pfam
Location: 9534 - 10283 (-)
Gene ID: SDE_RS17160
Type: pfam
Location: 10308 - 12056 (-)
Type: pfam
Location: 10308 - 12056 (-)
Gene ID: SDE_RS17165
Type: pfam
Location: 12125 - 13222 (-)
Type: pfam
Location: 12125 - 13222 (-)
Gene ID: SDE_RS17170
Type: STP
Location: 13436 - 14380 (-)
Type: STP
Location: 13436 - 14380 (-)
Gene ID: SDE_RS17175
Type: pfam
Location: 14505 - 15257 (-)
Type: pfam
Location: 14505 - 15257 (-)
Gene ID: SDE_RS17180
Type: TC
Location: 15321 - 16595 (-)
Type: TC
Location: 15321 - 16595 (-)
Gene ID: SDE_RS17185
Type: STP
Location: 16607 - 16951 (-)
Type: STP
Location: 16607 - 16951 (-)
Gene ID: SDE_RS17190
Type: CAZyme
Location: 17076 - 19286 (-)
Type: CAZyme
Location: 17076 - 19286 (-)
Gene ID: SDE_RS17195
Type: CAZyme
Location: 19303 - 21585 (-)
Type: CAZyme
Location: 19303 - 21585 (-)
Gene ID: SDE_RS17205
Type: CAZyme
Location: 22111 - 23142 (+)
Type: CAZyme
Location: 22111 - 23142 (+)
Gene ID: SDE_RS17210
Type: TF
Location: 23297 - 24067 (+)
Type: TF
Location: 23297 - 24067 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Species
Saccharophagus degradans
Gene Composition
Loading chart...
← Back to Cluster List