Cluster: PUL0194_HRGMv2_2501_C3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate: host glycan
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0194_HRGMv2_2501_C3 | HRGMv2_2501_4_6 | 5172 | 6854 | + | GH29 |
| CAZyme | PUL0194_HRGMv2_2501_C3 | HRGMv2_2501_4_7 | 6891 | 8978 | - | GH92 |
| CAZyme | PUL0194_HRGMv2_2501_C3 | HRGMv2_2501_4_8 | 9149 | 10429 | + | GH125 |
| CAZyme | PUL0194_HRGMv2_2501_C3 | HRGMv2_2501_4_9 | 10520 | 13165 | + | GH38 |
| pfam | PUL0194_HRGMv2_2501_C3 | HRGMv2_2501_4_10 | 13252 | 14121 | + | ROK |
| CAZyme | PUL0194_HRGMv2_2501_C3 | HRGMv2_2501_4_11 | 14115 | 15995 | + | GH20 |
Gene ID: HRGMv2_2501_4_6
Type: CAZyme
Location: 5172 - 6854 (+)
Type: CAZyme
Location: 5172 - 6854 (+)
Gene ID: HRGMv2_2501_4_7
Type: CAZyme
Location: 6891 - 8978 (-)
Type: CAZyme
Location: 6891 - 8978 (-)
Gene ID: HRGMv2_2501_4_8
Type: CAZyme
Location: 9149 - 10429 (+)
Type: CAZyme
Location: 9149 - 10429 (+)
Gene ID: HRGMv2_2501_4_9
Type: CAZyme
Location: 10520 - 13165 (+)
Type: CAZyme
Location: 10520 - 13165 (+)
Gene ID: HRGMv2_2501_4_10
Type: pfam
Location: 13252 - 14121 (+)
Type: pfam
Location: 13252 - 14121 (+)
Gene ID: HRGMv2_2501_4_11
Type: CAZyme
Location: 14115 - 15995 (+)
Type: CAZyme
Location: 14115 - 15995 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Composition
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