Cluster: PUL0193
🧬 Cluster Details
- Gene Count: 30
- CAZyme Count: 8
- Substrate: pectin
- Genome ID: PUL0193
- CGC Family ID: CGCFAM_02939
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | FP929033 | BXY_32430 | 1 | 2964 | - | GH2 |
| CAZyme | FP929033 | BXY_32440 | 2979 | 4844 | - | PL11 |
| CAZyme | FP929033 | BXY_32450 | 5101 | 6564 | + | GH28 |
| pfam | FP929033 | BXY_32460 | 6633 | 9803 | - | DUF4450 |
| pfam | FP929033 | BXY_32470 | 9769 | 10278 | - | DUF4450 |
| CAZyme | FP929033 | BXY_32480 | 10318 | 11394 | - | GH117 | GH117 |
| NULL(UNKNOWN) | FP929033 | BXY_32490 | 12058 | 12837 | - | NULL(UNKNOWN) |
| TF | FP929033 | BXY_32500 | 12962 | 17320 | - | HTH_AraC |
| TC | FP929033 | BXY_32510 | 17683 | 20763 | + | 1.B.14.6.1 |
| TC | FP929033 | BXY_32520 | 20814 | 22394 | + | 8.A.46.1.3 |
| pfam | FP929033 | BXY_32530 | 22433 | 25675 | + | DUF4450 |
| pfam | FP929033 | BXY_32540 | 25718 | 26710 | + | Mfa_like_1 |
| pfam | FP929033 | BXY_32550 | 26732 | 28321 | + | Mfa_like_1 |
| CAZyme | FP929033 | BXY_32560 | 28418 | 30241 | - | PL11 |
| pfam | FP929033 | BXY_32570 | 30649 | 31026 | + | DUF1565 | Pel9A-like_beta_helix |
| CAZyme | FP929033 | BXY_32580 | 31305 | 32615 | + | GH28 |
| CAZyme | FP929033 | BXY_32590 | 32918 | 35347 | + | CE20 | GH105 |
| NULL(UNKNOWN) | FP929033 | BXY_32600 | 35417 | 36529 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | FP929033 | BXY_32620 | 37734 | 38396 | + | NULL(UNKNOWN) |
| pfam | FP929033 | BXY_32630 | 38574 | 40757 | + | Fasciclin |
| TC | FP929033 | BXY_32640 | 40778 | 44029 | + | 1.B.14.6.1 |
| pfam | FP929033 | BXY_32650 | 44088 | 45581 | + | SusD_RagB | SusD-like_3 |
| pfam | FP929033 | BXY_32660 | 45599 | 47305 | + | Fasciclin | Fasciclin | DUF5108 |
| NULL(UNKNOWN) | FP929033 | BXY_32670 | 47309 | 48979 | + | NULL(UNKNOWN) |
| TC | FP929033 | BXY_32680 | 49001 | 52144 | + | 1.B.14.6.1 |
| NULL(UNKNOWN) | FP929033 | BXY_32690 | 52144 | 53826 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | FP929033 | BXY_32700 | 53948 | 56059 | + | NULL(UNKNOWN) |
| pfam | FP929033 | BXY_32710 | 56076 | 59339 | + | DUF4450 |
| CAZyme | FP929033 | BXY_32720 | 59405 | 60784 | + | GH28 |
| NULL(UNKNOWN) | FP929033 | BXY_32730 | 60815 | 61150 | + | NULL(UNKNOWN) |
Gene ID: BXY_32430
Type: CAZyme
Location: 1 - 2964 (-)
Type: CAZyme
Location: 1 - 2964 (-)
Gene ID: BXY_32440
Type: CAZyme
Location: 2979 - 4844 (-)
Type: CAZyme
Location: 2979 - 4844 (-)
Gene ID: BXY_32450
Type: CAZyme
Location: 5101 - 6564 (+)
Type: CAZyme
Location: 5101 - 6564 (+)
Gene ID: BXY_32460
Type: pfam
Location: 6633 - 9803 (-)
Type: pfam
Location: 6633 - 9803 (-)
Gene ID: BXY_32470
Type: pfam
Location: 9769 - 10278 (-)
Type: pfam
Location: 9769 - 10278 (-)
Gene ID: BXY_32480
Type: CAZyme
Location: 10318 - 11394 (-)
Type: CAZyme
Location: 10318 - 11394 (-)
Gene ID: BXY_32490
Type: null
Location: 12058 - 12837 (-)
Type: null
Location: 12058 - 12837 (-)
Gene ID: BXY_32500
Type: TF
Location: 12962 - 17320 (-)
Type: TF
Location: 12962 - 17320 (-)
Gene ID: BXY_32510
Type: TC
Location: 17683 - 20763 (+)
Type: TC
Location: 17683 - 20763 (+)
Gene ID: BXY_32520
Type: TC
Location: 20814 - 22394 (+)
Type: TC
Location: 20814 - 22394 (+)
Gene ID: BXY_32530
Type: pfam
Location: 22433 - 25675 (+)
Type: pfam
Location: 22433 - 25675 (+)
Gene ID: BXY_32540
Type: pfam
Location: 25718 - 26710 (+)
Type: pfam
Location: 25718 - 26710 (+)
Gene ID: BXY_32550
Type: pfam
Location: 26732 - 28321 (+)
Type: pfam
Location: 26732 - 28321 (+)
Gene ID: BXY_32560
Type: CAZyme
Location: 28418 - 30241 (-)
Type: CAZyme
Location: 28418 - 30241 (-)
Gene ID: BXY_32570
Type: pfam
Location: 30649 - 31026 (+)
Type: pfam
Location: 30649 - 31026 (+)
Gene ID: BXY_32580
Type: CAZyme
Location: 31305 - 32615 (+)
Type: CAZyme
Location: 31305 - 32615 (+)
Gene ID: BXY_32590
Type: CAZyme
Location: 32918 - 35347 (+)
Type: CAZyme
Location: 32918 - 35347 (+)
Gene ID: BXY_32600
Type: null
Location: 35417 - 36529 (+)
Type: null
Location: 35417 - 36529 (+)
Gene ID: BXY_32620
Type: null
Location: 37734 - 38396 (+)
Type: null
Location: 37734 - 38396 (+)
Gene ID: BXY_32630
Type: pfam
Location: 38574 - 40757 (+)
Type: pfam
Location: 38574 - 40757 (+)
Gene ID: BXY_32640
Type: TC
Location: 40778 - 44029 (+)
Type: TC
Location: 40778 - 44029 (+)
Gene ID: BXY_32650
Type: pfam
Location: 44088 - 45581 (+)
Type: pfam
Location: 44088 - 45581 (+)
Gene ID: BXY_32660
Type: pfam
Location: 45599 - 47305 (+)
Type: pfam
Location: 45599 - 47305 (+)
Gene ID: BXY_32670
Type: null
Location: 47309 - 48979 (+)
Type: null
Location: 47309 - 48979 (+)
Gene ID: BXY_32680
Type: TC
Location: 49001 - 52144 (+)
Type: TC
Location: 49001 - 52144 (+)
Gene ID: BXY_32690
Type: null
Location: 52144 - 53826 (+)
Type: null
Location: 52144 - 53826 (+)
Gene ID: BXY_32700
Type: null
Location: 53948 - 56059 (+)
Type: null
Location: 53948 - 56059 (+)
Gene ID: BXY_32710
Type: pfam
Location: 56076 - 59339 (+)
Type: pfam
Location: 56076 - 59339 (+)
Gene ID: BXY_32720
Type: CAZyme
Location: 59405 - 60784 (+)
Type: CAZyme
Location: 59405 - 60784 (+)
Gene ID: BXY_32730
Type: null
Location: 60815 - 61150 (+)
Type: null
Location: 60815 - 61150 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Composition
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