Cluster: PUL0192
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 14
- Substrate: pectin
- Genome ID: PUL0192
- CGC Family ID: CGCFAM_00927
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | FP929033 | BXY_32120 | 1 | 2766 | - | GH106 |
| CAZyme | FP929033 | BXY_32130 | 2766 | 4169 | - | GH28 |
| pfam | FP929033 | BXY_32140 | 4166 | 4768 | - | DUF4450 |
| CAZyme | FP929033 | BXY_32150 | 4719 | 6254 | - | GH28 |
| CAZyme | FP929033 | BXY_32160 | 6310 | 7548 | - | CE12 |
| CAZyme | FP929033 | BXY_32170 | 7679 | 10555 | - | GH2 |
| NULL(UNKNOWN) | FP929033 | BXY_32180 | 10554 | 10682 | + | NULL(UNKNOWN) |
| CAZyme | FP929033 | BXY_32190 | 10844 | 13156 | + | CBM32 | GH43_18 | GH43_34 |
| CAZyme | FP929033 | BXY_32200 | 13787 | 15877 | + | GH42 |
| CAZyme | FP929033 | BXY_32210 | 15940 | 17322 | + | GH28 |
| pfam | FP929033 | BXY_32220 | 17411 | 18100 | + | Lipase_GDSL_2 | Lipase_GDSL_lke |
| pfam | FP929033 | BXY_32230 | 18193 | 20274 | - | SusD_RagB | SusD-like_3 |
| TC | FP929033 | BXY_32240 | 20299 | 23430 | - | 1.B.14.6.1 |
| pfam | FP929033 | BXY_32260 | 25047 | 26084 | + | Mfa_like_1 |
| pfam | FP929033 | BXY_32270 | 26139 | 27764 | + | Mfa_like_1 |
| TC | FP929033 | BXY_32280 | 27825 | 31004 | + | 1.B.14.6.1 |
| pfam | FP929033 | BXY_32290 | 31026 | 33038 | + | SusD_RagB | SusD-like_3 |
| TC | FP929033 | BXY_32300 | 33086 | 36136 | + | 1.B.14.6.1 |
| pfam | FP929033 | BXY_32310 | 36158 | 37879 | + | SusD_RagB | SusD-like_3 |
| CAZyme | FP929033 | BXY_32320 | 37957 | 40092 | + | PL11 |
| CAZyme | FP929033 | BXY_32330 | 40264 | 43662 | + | PL26 |
| CAZyme | FP929033 | BXY_32340 | 43981 | 45615 | - | CE12 | CE12 |
| CAZyme | FP929033 | BXY_32350 | 45745 | 46836 | - | GH105 |
| CAZyme | FP929033 | BXY_32360 | 47129 | 48970 | + | PL11_1 |
| CAZyme | FP929033 | BXY_32370 | 48974 | 50383 | + | GH105 |
| pfam | FP929033 | BXY_32380 | 50403 | 50717 | + | rhaM |
| TF | FP929033 | BXY_32390 | 50868 | 55235 | + | HTH_AraC | HTH_AraC |
Gene ID: BXY_32120
Type: CAZyme
Location: 1 - 2766 (-)
Type: CAZyme
Location: 1 - 2766 (-)
Gene ID: BXY_32130
Type: CAZyme
Location: 2766 - 4169 (-)
Type: CAZyme
Location: 2766 - 4169 (-)
Gene ID: BXY_32140
Type: pfam
Location: 4166 - 4768 (-)
Type: pfam
Location: 4166 - 4768 (-)
Gene ID: BXY_32150
Type: CAZyme
Location: 4719 - 6254 (-)
Type: CAZyme
Location: 4719 - 6254 (-)
Gene ID: BXY_32160
Type: CAZyme
Location: 6310 - 7548 (-)
Type: CAZyme
Location: 6310 - 7548 (-)
Gene ID: BXY_32170
Type: CAZyme
Location: 7679 - 10555 (-)
Type: CAZyme
Location: 7679 - 10555 (-)
Gene ID: BXY_32180
Type: null
Location: 10554 - 10682 (+)
Type: null
Location: 10554 - 10682 (+)
Gene ID: BXY_32190
Type: CAZyme
Location: 10844 - 13156 (+)
Type: CAZyme
Location: 10844 - 13156 (+)
Gene ID: BXY_32200
Type: CAZyme
Location: 13787 - 15877 (+)
Type: CAZyme
Location: 13787 - 15877 (+)
Gene ID: BXY_32210
Type: CAZyme
Location: 15940 - 17322 (+)
Type: CAZyme
Location: 15940 - 17322 (+)
Gene ID: BXY_32220
Type: pfam
Location: 17411 - 18100 (+)
Type: pfam
Location: 17411 - 18100 (+)
Gene ID: BXY_32230
Type: pfam
Location: 18193 - 20274 (-)
Type: pfam
Location: 18193 - 20274 (-)
Gene ID: BXY_32240
Type: TC
Location: 20299 - 23430 (-)
Type: TC
Location: 20299 - 23430 (-)
Gene ID: BXY_32260
Type: pfam
Location: 25047 - 26084 (+)
Type: pfam
Location: 25047 - 26084 (+)
Gene ID: BXY_32270
Type: pfam
Location: 26139 - 27764 (+)
Type: pfam
Location: 26139 - 27764 (+)
Gene ID: BXY_32280
Type: TC
Location: 27825 - 31004 (+)
Type: TC
Location: 27825 - 31004 (+)
Gene ID: BXY_32290
Type: pfam
Location: 31026 - 33038 (+)
Type: pfam
Location: 31026 - 33038 (+)
Gene ID: BXY_32300
Type: TC
Location: 33086 - 36136 (+)
Type: TC
Location: 33086 - 36136 (+)
Gene ID: BXY_32310
Type: pfam
Location: 36158 - 37879 (+)
Type: pfam
Location: 36158 - 37879 (+)
Gene ID: BXY_32320
Type: CAZyme
Location: 37957 - 40092 (+)
Type: CAZyme
Location: 37957 - 40092 (+)
Gene ID: BXY_32330
Type: CAZyme
Location: 40264 - 43662 (+)
Type: CAZyme
Location: 40264 - 43662 (+)
Gene ID: BXY_32340
Type: CAZyme
Location: 43981 - 45615 (-)
Type: CAZyme
Location: 43981 - 45615 (-)
Gene ID: BXY_32350
Type: CAZyme
Location: 45745 - 46836 (-)
Type: CAZyme
Location: 45745 - 46836 (-)
Gene ID: BXY_32360
Type: CAZyme
Location: 47129 - 48970 (+)
Type: CAZyme
Location: 47129 - 48970 (+)
Gene ID: BXY_32370
Type: CAZyme
Location: 48974 - 50383 (+)
Type: CAZyme
Location: 48974 - 50383 (+)
Gene ID: BXY_32380
Type: pfam
Location: 50403 - 50717 (+)
Type: pfam
Location: 50403 - 50717 (+)
Gene ID: BXY_32390
Type: TF
Location: 50868 - 55235 (+)
Type: TF
Location: 50868 - 55235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Composition
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